Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0476 ATGAGATCCACTAACGCGCCCAACGCGCCCAACGCGCCCACTCCAACACCACTTCCACCACCGCCTATGGCGGAGAGAGGTGTTACAACCACCAAGCCAAAACGGCCACCACGGCCACCCTCAGGGCGAACCAACCTAGCCTCATGTATAGTCGCTACAATCTTCTTAATCTTCATCATCATCGTCATCCTCATCGTTTACTTCATGGTATTTAAACCACAAGACCCTAGAATCGCCGTTAGCTCCGTTAAACTCCCGTCATTCTCCGTCGTTAACGGCACCGTTAACTTCACTTTCTCACAATACGCTTCCATCAGAAACCCTAACCGTGCCGTTTTCTCCCACTTCGACAGCACCCTCCAGCTCATCTACTCCGGCAGGCAGGTCGGGTTCATGTTCATTCCCGCCGGCGAGATCGACGCCGGTCGAACGCAGTACATGGTGGCCACGTTTTCGATTCAGTCGTTTCCGTTGTCCTCTCCGGTTATTAACGTGGGGCCCACGCTGGCAAACGGTGACGGTGTTGGGTTCGATTACGGGTTGAGGATTCAACCGACGATGGAGATTGAGTCGAAGTTAGAGATGGCGGGGCGCGTGAAGGTTTTGCACTTCTTCAGTCATCGCGTGCAGTCAAATGCCGGTTGCAGAGTCGCTGTTGCAGTTACCGATGGTTCTGTTTTAGGGTTTCACTGTTAA 696 0.5316 MRSTNAPNAPNAPTPTPLPPPPMAERGVTTTKPKRPPRPPSGRTNLASCIVATIFLIFIIIVILIVYFMVFKPQDPRIAVSSVKLPSFSVVNGTVNFTFSQYASIRNPNRAVFSHFDSTLQLIYSGRQVGFMFIPAGEIDAGRTQYMVATFSIQSFPLSSPVINVGPTLANGDGVGFDYGLRIQPTMEIESKLEMAGRVKVLHFFSHRVQSNAGCRVAVAVTDGSVLGFHC 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0476 231 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 37 231 - -
Lal23g0476 231 PANTHER OS05G0238400 PROTEIN 37 231 - -
Lal23g0476 231 Pfam Late embryogenesis abundant protein 104 213 IPR004864 -
Lal23g0476 231 MobiDBLite consensus disorder prediction 10 26 - -
Lal23g0476 231 SUPERFAMILY LEA14-like 58 187 - -
Lal23g0476 231 MobiDBLite consensus disorder prediction 1 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0476 Lal-Chr23 7511393 7512088 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0476 - - vun:114178281 334.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0476 23 7511393 7512088 Lal23g0476 23 7511393 7512088 ECH
Lal16g1148 16 7832569 7833255 Lal23g0476 23 7511393 7512088 LSH