Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1148 ATGAGATCCACTATCACTGCCAACACACCCATTCAGCCACCACTTCCACCACCGCCTATGGCGGAGAGATATGTTACCACCGCCAAGCCAAAGAAGCCACCACGGCCACCGTCAGGGCGAACTAACCTAGCCTCATGCGTCGTCGCCACAATATTCTTAATCTTCATCATCATCGTCATCCTCATCCTTTACTTCATGTTATTCAAACCACAAGACCCTAAAATCGCCGTTAACTCCGTTAAGCTCCCCTCATTCTCCGTCGTTAACGGCACCGTTAACTTCACCTACGCTCAATACGCTTCCATCAGAAACCCTAACCGCGCCGCTTTCTCCCACTTCGACAGCACCCTCCAGCTCATCTACTCCGGCACGCAGGTCGGGTTCATATTCATCCCCGCCGGCGAGATCGATGCCGGCCGGACTCAGAACATGGCGGCCACGTTTTCCGTCCAATCGTTCCCGTTGTCTTCTCCGGTAATCAACGTGGGGCCCACGCTGGCAAACGGTGACGGTGTTGGGTTAAATTACGGGTTGAGGGTGCAACCTACGATGGAGATTGAATCGAAGTTGGAGATGGCGGGGCGCGTGAGAGTGTTGCACTTCTTCAGTCATCGCGTGAAGGCCAATGCTGGTTGCAGAGTCGCTGTTGCTGTTAGCGACGGTTCTGTTTTAGGTTTTCACTGTTAA 687 0.5328 MRSTITANTPIQPPLPPPPMAERYVTTAKPKKPPRPPSGRTNLASCVVATIFLIFIIIVILILYFMLFKPQDPKIAVNSVKLPSFSVVNGTVNFTYAQYASIRNPNRAAFSHFDSTLQLIYSGTQVGFIFIPAGEIDAGRTQNMAATFSVQSFPLSSPVINVGPTLANGDGVGLNYGLRVQPTMEIESKLEMAGRVRVLHFFSHRVKANAGCRVAVAVSDGSVLGFHC 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1148 228 SUPERFAMILY LEA14-like 53 182 - -
Lal16g1148 228 PANTHER OS05G0238400 PROTEIN 34 228 - -
Lal16g1148 228 MobiDBLite consensus disorder prediction 1 39 - -
Lal16g1148 228 Pfam Late embryogenesis abundant protein 101 209 IPR004864 -
Lal16g1148 228 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 34 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1148 Lal-Chr16 7832569 7833255 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1148 - - vun:114178281 329.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1148 16 7832569 7833255 Lal16g1148 16 7832569 7833255 ECH
Lal16g1148 16 7832569 7833255 Lal23g0476 23 7511393 7512088 LSH