Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0427 ATGGTAAAACATCGGTTAAGAGAGTCTTTAAAATCTTTGTTTGGAAGTCATGTGGATCCTAATAAAGATGAGCAACTCCAGGGAGCTAAAATAGAAATTGAACATAAAGTGAAAAGGATATTGAATCTTATTAAAGATGACAACCTGGAAGAGGATGGTGCCCTAGTCGAACTTTCTATGAATGAACCACTTGCTGAACTGATCGAGGATTTCTACAATCAATACCAATCACTCTATGCACAATATGATAATCTAACAGGCCTTTTACGGAAAAAGATGAATGACAAGCGAGAAAAGGAGAGTTCTTCATCCAGCTCAGATTCAGATTTGGATTATTCTTCAAGGGACAATGGCAGCAAAAATGGACAACTGGAAAATGAATCTCACAAGATAATTGATGGCTTAAAGCAAGAACTTGAAATAGCACACAAGGAAGTTGCTGAGTTGAATCAGGAGTTGACAACTACAAATGAAGAGAAAGAAGATCTAAATTCAAAATATCTTGAGACATTGAGCAAGATACAAGAGGCAGATAAGATCATCATGGATTTGAAAACTGATGCTGAAGCATTAGGTATTCAACAATCAAAACTTTTGGTTGCAAATGATGAACTAAAGCAGCAACTTGACATTTCTGGTAAGATAGAAGCTGAACTAAGTCAAAAATTGGAAGATTTGAAGACAGAAAAAGACAGTTTGACTGTGGAGAAAGAGACAGCTCTGCAACAGATTGATGAGGAAAAGAAGATTAACGATGGCCTGAGAACCATGGTTAGTCCACTGAAAGATGAAAAGTTAGCTCTTTGGGAAGAGTTAAAAGCTGTTACCGGGGAACTTTCCGTTTTGAAGCCGAAGCTGGAACATGCAGAACAACAAGTGATTAATATAAGCCATAATCTGAAAGTCGCTGAGGAAGAAAATGAATCTTTAAAATTGAAACTTTCACAGGCTTTAGATAAGGTCCAACTGGATCACAACAGAATACAAGAACTTGAAGATGAATCTAGTCATTTAAAGGAAAAGCTTGAGGGTAGAGACAAGGAAGTTTCAACCCTCCGTCAGATTCATGAAGGGTATCAGAATGAATCATCTAGTAAAATTAAGGAAATAGAGGCACAAGTTGCTAACCTGGAACTGGAATTAGAATCACTTCAAAACCAGAAAAGAGATATGGAAGAGCAAATTAAGAGTAGCAAAACTGAGGCAATGGAACTGGGTGAGCAAAATTTAGGCCTAAAAAACCAAATTTCAGAACTTGAAACTAAGTCCAAAGAAAGAGAAGAGGAACTATCTGCTCTCATGAAGAAACTCGAAGATAATGAGAATGACTCATCATCTAAAGTAGCAGATTTCACATCTCAGATAAACAAGCTGATAACTGATATAGGCACAGTACATGCTGAGAAAAATGAACTGGAAGAGCAGATAATTTTTAAAAGTAATGAAGCATCAGATCAAGTCAAAAGCATTGCTGATGAGGTGAAAAGGTTGCAGCAGGAAGTGGAGTCCTTACAACACCAGAAATCTGATTTGGATGTTCAGCTGGTAGAAAAAATACAAGAAAATTCGGAGTATGGAATTCAAATGCATACTCTAAAAGAGGAGCTTGACAGAAAAGCCCTGGAAAAAGAGAGACTTAGAGAAGACAGAGAAAATTTAACGATTCAGATAAGGAATCTGGAATTAGAGATGATCACTATAGAGAACCATAAGAGTGAAAATGAAGAGCAAATAAAGGGTAGCAGTGGTGAGATCAGTCATCTGAGACAGGAGAAATTGGAGCTACAACACAAAATAGTAGAACTGGAGAAAATATCAGAAGAGAGAGAATCTGAGTTTTCTGTTCTCCAAGATCAGCTTAGGAAAATAGAGGGAGAGGGCTCAGCTCAAATAGCAACCTTCACTGAGAAAATTAAGGCTAACAGCGATGAGATTGGCCATTTGAGTCAGGAGAAGTTAGTGTTACAAGACAAAATAGCAGAACTGGAGAAAAGATTAGCAGAGAGAGATTCCGAGTTTTCTGTTCTTCAGCTTCAACATAGTAAAGTAGAGGAAGAGGGATCAGCTCAAATAGCACTCTTCACTGAGAAAATAAGCAATCTTAAACATGATTTGGTTTCCCTACAGAATGAGAAACAGAGACTAGCCCAGCAGTGTGAAAGCCTGAAGTTGGAGGTGGATTCCATTTTCGGTCAGAAGAGTGAAGTTGAGGAGCAAACAAAAGCTAAAGACCATGAGAACAGGGAGCTGAAAGAGGAAATTTTGGGATTGCAGGGAACAATTACTGCACTGGAGAAAACATTAGCAGAGAAAGAGGTTGACTTCTCCAATTTACTGGAAAAGCTTCATGAAAAAGAGAATGAGGCTTCAGAGAAAATAGTTGCCTTCACTGCCCAAATAAACAATCTGCAAGAAGAATTGCTATCCTTGCAGAAAACAAAAGAAGAATTGGAGCGGCACTGTGAACAAGTTAAAGAAAGACATGCAGAAAGCCTAGTAGCTGTAGAGAATGAAAAGACTGAGTTAGCAAGCAGATCTGTGGAACATCAGAGAACATCGGAGGAACGAGAAGATGCGAATCAGAAGCTGAATGAAAAATATAAACAACTTGATGGTTGGTTTAGGGAATGCGAGGCTAATCTTGAAGTTGCAGAGAAAAGGATTGAAGAAATGGAAGAGGAATTTCATAAAGGCAGTGAGTCCAAAGATAAGATTGTAGATAATTTGGAACATACAGTTGAAGAACTGAAAACAGACTTAGAAGAGAAAGGATATGAGCTCAATACTCTGCTTGAGAAAGTCCCTATGCTTGAAGTCAAGCTTCGGCTGTCAAACCAGAAGCTCCGAGTCACGGAACAATTGCTGACTGAGAAGGAGGAGAGCTTCACAAGGGCAGAAGAGAAGTTCCAGCAAGAGCAGAGAGCACTTGAAGACAAGATTACTACATTGTCAGCAATAATTGCTTCTAACAATGAAGCTTTTCAGCAAATCATCTCTAATGTTAAGGAGAGTGTGAACAGTGTGATGACTGGCATTGAAACTGTTAGCTTTAAATTCTCCGATGACTGTAAAAACTACGAAACCTCTATCTCCAATATCTCATACGAGCTTCGGGTTGCAAAAACCTGTTTCAGTGAAATCAACAAGAGAAAAGAGGAATTAAACAAAGACAGACAGCATTTATTGGAGCAGCTGAAGGATGAACGTGAACGGGAATTGGCTTTGAGGAAGGTGATCGAGAAGCTGGAGGCGAAGTCGAGCGCAGAGGAATTAGACAAGATGAATCTGACAACAACCGTGGTTCAACTTAAGAGGACAGTTGAAGAACTAGATAAAATTATAAAAGAAAAAGATGATGGTATGTTGGATTTGGGAGAGGAGAAAAGAGAGGCTATCAGACAGCTATGTTTGTGGATTGAATATCATCGTGGTCGTTATGATTATCTGAAGGATGTTCTATCAAAGAGTCGCAGAGGCCAAAGAGCAGTGTAG 3492 0.3869 MVKHRLRESLKSLFGSHVDPNKDEQLQGAKIEIEHKVKRILNLIKDDNLEEDGALVELSMNEPLAELIEDFYNQYQSLYAQYDNLTGLLRKKMNDKREKESSSSSSDSDLDYSSRDNGSKNGQLENESHKIIDGLKQELEIAHKEVAELNQELTTTNEEKEDLNSKYLETLSKIQEADKIIMDLKTDAEALGIQQSKLLVANDELKQQLDISGKIEAELSQKLEDLKTEKDSLTVEKETALQQIDEEKKINDGLRTMVSPLKDEKLALWEELKAVTGELSVLKPKLEHAEQQVINISHNLKVAEEENESLKLKLSQALDKVQLDHNRIQELEDESSHLKEKLEGRDKEVSTLRQIHEGYQNESSSKIKEIEAQVANLELELESLQNQKRDMEEQIKSSKTEAMELGEQNLGLKNQISELETKSKEREEELSALMKKLEDNENDSSSKVADFTSQINKLITDIGTVHAEKNELEEQIIFKSNEASDQVKSIADEVKRLQQEVESLQHQKSDLDVQLVEKIQENSEYGIQMHTLKEELDRKALEKERLREDRENLTIQIRNLELEMITIENHKSENEEQIKGSSGEISHLRQEKLELQHKIVELEKISEERESEFSVLQDQLRKIEGEGSAQIATFTEKIKANSDEIGHLSQEKLVLQDKIAELEKRLAERDSEFSVLQLQHSKVEEEGSAQIALFTEKISNLKHDLVSLQNEKQRLAQQCESLKLEVDSIFGQKSEVEEQTKAKDHENRELKEEILGLQGTITALEKTLAEKEVDFSNLLEKLHEKENEASEKIVAFTAQINNLQEELLSLQKTKEELERHCEQVKERHAESLVAVENEKTELASRSVEHQRTSEEREDANQKLNEKYKQLDGWFRECEANLEVAEKRIEEMEEEFHKGSESKDKIVDNLEHTVEELKTDLEEKGYELNTLLEKVPMLEVKLRLSNQKLRVTEQLLTEKEESFTRAEEKFQQEQRALEDKITTLSAIIASNNEAFQQIISNVKESVNSVMTGIETVSFKFSDDCKNYETSISNISYELRVAKTCFSEINKRKEELNKDRQHLLEQLKDERERELALRKVIEKLEAKSSAEELDKMNLTTTVVQLKRTVEELDKIIKEKDDGMLDLGEEKREAIRQLCLWIEYHRGRYDYLKDVLSKSRRGQRAV 1163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0427 1163 Coils Coil 455 475 - -
Lal23g0427 1163 PANTHER COP1-INTERACTIVE PROTEIN 1 635 721 - -
Lal23g0427 1163 PANTHER COP1-INTERACTIVE PROTEIN 1 711 1162 - -
Lal23g0427 1163 PANTHER COP1-INTERACTIVE PROTEIN 1 1 638 - -
Lal23g0427 1163 MobiDBLite consensus disorder prediction 106 121 - -
Lal23g0427 1163 Coils Coil 906 933 - -
Lal23g0427 1163 Coils Coil 360 443 - -
Lal23g0427 1163 Coils Coil 874 901 - -
Lal23g0427 1163 Coils Coil 286 348 - -
Lal23g0427 1163 Coils Coil 733 830 - -
Lal23g0427 1163 Coils Coil 480 514 - -
Lal23g0427 1163 Gene3D - 831 1011 - -
Lal23g0427 1163 Gene3D - 316 480 - -
Lal23g0427 1163 Gene3D - 551 726 - -
Lal23g0427 1163 Coils Coil 948 975 - -
Lal23g0427 1163 Coils Coil 216 243 - -
Lal23g0427 1163 Coils Coil 645 679 - -
Lal23g0427 1163 Coils Coil 529 577 - -
Lal23g0427 1163 Coils Coil 132 166 - -
Lal23g0427 1163 Coils Coil 691 725 - -
Lal23g0427 1163 Coils Coil 585 608 - -
Lal23g0427 1163 Pfam KIP1-like protein 14 83 IPR011684 GO:0003779
Lal23g0427 1163 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 89 IPR011684 GO:0003779
Lal23g0427 1163 Coils Coil 1044 1085 - -
Lal23g0427 1163 MobiDBLite consensus disorder prediction 839 860 - -
Lal23g0427 1163 MobiDBLite consensus disorder prediction 93 128 - -
Lal23g0427 1163 PANTHER COP1-INTERACTIVE PROTEIN 1 1 638 - -
Lal23g0427 1163 PANTHER COP1-INTERACTIVE PROTEIN 1 711 1162 - -
Lal23g0427 1163 PANTHER COP1-INTERACTIVE PROTEIN 1 635 721 - -
Lal23g0427 1163 Coils Coil 849 869 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0427 Lal-Chr23 6954077 6958886 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0427 - K20478 lang:109331818 1383.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0427 23 6954077 6958886 Lal23g0427 23 6954077 6958886 ECH
Lal16g1165 16 7960186 7963050 Lal23g0427 23 6954077 6958886 LSH