Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1165 ATGATAAACCATCGGTCAAGGCCCTCAAGGGAATCAATTAAGTCCTTTGGGAGTCTACTTGATCCTGAAAAAGATGAAGAACTTAAAAGAACCAAAACAGATATTGAAAGCAACATGACAAAGATCATGAAGCTTATTCAGAATGAAGAGCAAAGCAATGAAGTTAGGAACCTCACACATCCTAGAGAGGAGACAGGACTTGTGGGACTAATTGAGGACTTATACAATCAGTACCAGTCACTTTATGCAATGTATGATGGTCTCTATGGAGAGCTTGGGAAACTAGTTTCTCGCAGAAGAAGCCGGAGAATTTCGATGTCCTTCTCCGACTCAGACTCAGAGTACTTTTCACCAGAGGAAGTAGAGTATAATAACCAAAGGTCAGAAACATATGAAGCTCTTAATTCTGAAGCATCAATGGAAGCAAAGAAGTTTGAGGAGAAGTTAACTTCAAATATGAAAGAGATAGAGAACTTGAGCCATCAGAAAAGGAATCTTGAACTTCAAGTTGAAAGCCAAGCAGAAGAAGTTAAACAGCTAAGTGAAAAGAATAAAGAGCTTGAGTTGTTGTTGAAAGAGAAATATGGTGCAGTATCTATTCTTCGGGCCAAATTAAGAAACAATGAGAACCAGGCAAGTTCCAACATTGAAGAATTGATGGCACAGATTAACAAGCTTGAACTGGATGCCAAACATCTGCAGACACAGAAAGATGAAATGGAAGAAAAATGTAAATGTGATGAAAATGAATCATTAGCCCAAACAAAGGATTTGATGAACCAGCTTAATGTTATGCAGCAAAACTTAGATTCTATATGCAAGCAGAACAAGGAATTGGAAGCTATGATGGAAAAAGAGAGGGACGAAACATCTCAATACTCAATTCAAATAGAAAATTTGAAGGATAATTTAGCTGAAATGAGTTCGGTTGAACAGATTAGGCTGGAAGAGAAAGAGAATTTTCTTGCAAGGATAAGGGACTTGGAACTCGAATTGGAAACTCGAACCAATGAGAAGAATGAATTGGAAGAGCAATTAAGGGATAGAAGTTATGAGAGTAAACAGCTGGAGGATGAAAACAAGACCCTGCAGGATAGAAACAATGAACTAAAAGGAGCAATGACACAAAGGGGTGATGACATATCTGCATTTCTGAAGGAACATGACGGCGATAAAAATGGAGCGTCTATGCAGATTATGGATTTAAAACAAGAAGTTAATGTTCTGAGACTAGAATTAGACTCGCTGCATGAACACAAAAACAAGTTGGAGCAACAAAATGAGCGAAGGGTGAAGGAACACGCAGAAAGCCTAGCAAAGATGGAAAACTTGAACCGCAAGTTATCAAGCCAGATAGCTGATCAAGCAGCAACAATCGAAAGAATAAGCGCAGAGCATAAACAGGAGAAAATCTTATCGAATAAGTTGAAGTTGAATCGGCAATCAACCGAAAGGAAAACAGAAGAGTTGGCACAAGAGTTCAGAAGGAAAATGGAAGACAATATCCGCTTGTTGCACCAGAGAATCCATGTAGCAGAACAGCTGAACAATGAGAACAAAAATAGTTGCAAAATGACAAAGCAAAGGTATGAGCAAGAGAACAAATTACTTGAAGAGAAAGTTACTAGTTATGAAGAGGAACTAAGGATGCTTAAAATGAGTCCAACACATTCACCAGTTAGTCCTCAAAACCGGTTATTAGTTTTGGAAGCTCTACATGGCTTAGAATTGTTTGTTCTAAAAGGGTTCGATTTCGCGACGAACAAGATTGACGAGCATAAAGAGTATGTGATGAGCAGTGTGTCTAAAATGATGAGTGAGGTTATGTTTATGAAGGATTGGATAAAGCAAAGGAATGATGAGATGAAAAAGTTGATGGAAAATGCTAATCGCCTTAATATGTTACTGAATAGTAAAGAAGAGCAGGAATTATTGTTAAGAGAAAAGGTGTGGGAATTAGAAGCTAAGGTGAGCAAGGAAGGAGGGGATAAGCTGAATCTAGCAAAAGCTGTAAGTCAGTTTGAGAAAAAAGTTGGAAAATTAGAAAAGAAACTTAAAGAGAAAGATGAGGAATTGATTAACCTTGGGGAAAAGAAAAGGGAAGCAATAAGACAACTTTGTTTTATGGTTGATTTTCATCGTGACCGTTGTAGCTATCTAAGGAATTTTGTCACTGAGACAAGGAAAGTCAATAATAGGACATGA 2205 0.3773 MINHRSRPSRESIKSFGSLLDPEKDEELKRTKTDIESNMTKIMKLIQNEEQSNEVRNLTHPREETGLVGLIEDLYNQYQSLYAMYDGLYGELGKLVSRRRSRRISMSFSDSDSEYFSPEEVEYNNQRSETYEALNSEASMEAKKFEEKLTSNMKEIENLSHQKRNLELQVESQAEEVKQLSEKNKELELLLKEKYGAVSILRAKLRNNENQASSNIEELMAQINKLELDAKHLQTQKDEMEEKCKCDENESLAQTKDLMNQLNVMQQNLDSICKQNKELEAMMEKERDETSQYSIQIENLKDNLAEMSSVEQIRLEEKENFLARIRDLELELETRTNEKNELEEQLRDRSYESKQLEDENKTLQDRNNELKGAMTQRGDDISAFLKEHDGDKNGASMQIMDLKQEVNVLRLELDSLHEHKNKLEQQNERRVKEHAESLAKMENLNRKLSSQIADQAATIERISAEHKQEKILSNKLKLNRQSTERKTEELAQEFRRKMEDNIRLLHQRIHVAEQLNNENKNSCKMTKQRYEQENKLLEEKVTSYEEELRMLKMSPTHSPVSPQNRLLVLEALHGLELFVLKGFDFATNKIDEHKEYVMSSVSKMMSEVMFMKDWIKQRNDEMKKLMENANRLNMLLNSKEEQELLLREKVWELEAKVSKEGGDKLNLAKAVSQFEKKVGKLEKKLKEKDEELINLGEKKREAIRQLCFMVDFHRDRCSYLRNFVTETRKVNNRT 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1165 734 Coils Coil 671 705 - -
Lal16g1165 734 PANTHER COP1-INTERACTIVE PROTEIN 1 31 730 - -
Lal16g1165 734 Coils Coil 615 642 - -
Lal16g1165 734 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 12 92 IPR011684 GO:0003779
Lal16g1165 734 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 31 730 - -
Lal16g1165 734 Coils Coil 392 458 - -
Lal16g1165 734 MobiDBLite consensus disorder prediction 1 28 - -
Lal16g1165 734 Coils Coil 473 493 - -
Lal16g1165 734 Pfam KIP1-like protein 18 86 IPR011684 GO:0003779
Lal16g1165 734 Coils Coil 318 376 - -
Lal16g1165 734 Coils Coil 520 554 - -
Lal16g1165 734 Coils Coil 262 303 - -
Lal16g1165 734 MobiDBLite consensus disorder prediction 337 369 - -
Lal16g1165 734 MobiDBLite consensus disorder prediction 337 366 - -
Lal16g1165 734 Coils Coil 202 250 - -
Lal16g1165 734 Coils Coil 142 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1165 Lal-Chr16 7960186 7963050 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1165 - - gsj:114411401 739.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1165 16 7960186 7963050 Lal16g1165 16 7960186 7963050 ECH
Lal16g1165 16 7960186 7963050 Lal23g0427 23 6954077 6958886 LSH