Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0403 ATGTTGAGTACCTCCCCTTCTTCTTCTTCTTCTTCTTCTTCTTTTGTCTTCACTCGCCCCTTTCTTCCAATTAAGGGTTCTCTCCGACCCACCACACTACACCCTTTCTCTCGCAGTTTTCGGATCTTGGAATTTCATGCTAGGCCTTTAAAGAATAAATTGAGTATTTTGTGCTTTAGGCATGAGCATCATTCTCCAGAAACTCCGAAACCTGAAATTATAGACCACTATCTTCCTGAGGAGTCAGTACAATCTGAATTAAATAACTCCAGTGTAGCCAAAAGAAACTGGAACTCAAGCCTCCAGAAGGCTGCAAATGAAGTATTCATGGTATTTGGCGATCGGTGGGTTGTACCATGGAATGCAATGACCATATTACAAGTTATTCTTCTTTGGACAACGGCATTTTGGTTTATAGGATCTTGGATGATTCCTTTTGCAGTCCATATAACTGGTTTTAACAAGGAATCTTTGACGTTTAGAGGACAAGCACTATTTAGCCTTGTTATTGACGTAACCGAAGGAATAGCTGGAATTGCAATTCTTCTTCGTTGTCTTTCTCGATTTCATCCCCTTCCACCTGACTGGTTCAAGTTTAGCCTGAAAGGGAATTGGCAAATAGATGTCATCCTGGGATGTCTCATGTTTCCTATCGTAAATCGGCTGTCACAGTTCAACCTTGATCTTCTACCTCTTTTACCCTCTACGCCTGTCACCTTTTCAAGTGTTGAGCAATCAATAAGAGCGAGGGATCCCGTAGCAATGTTTTTATACGCAATAGTAGTATCAGTCTGTGCTCCGGTATGGGAGGAGATAGTTTTCCGCGGCTTTCTACTCCCATCGCTTACCAAATACATGCCGGTGTGGTGTGCAATACTGGTAAGTTCAATTGCTTTTGCACTTGCACATTTTAATATACAGAGGATGCTGCCACTTATGTTTCTTGGGATGGTGATGGGTGTTATATTTACAAGGTCAAGGAATTTATTGCCATCGATGCTTTTGCATAGTCTATGGAATGGGTTCGTTTTCCTAGACTTGATGAAGTAG 1050 0.4162 MLSTSPSSSSSSSSFVFTRPFLPIKGSLRPTTLHPFSRSFRILEFHARPLKNKLSILCFRHEHHSPETPKPEIIDHYLPEESVQSELNNSSVAKRNWNSSLQKAANEVFMVFGDRWVVPWNAMTILQVILLWTTAFWFIGSWMIPFAVHITGFNKESLTFRGQALFSLVIDVTEGIAGIAILLRCLSRFHPLPPDWFKFSLKGNWQIDVILGCLMFPIVNRLSQFNLDLLPLLPSTPVTFSSVEQSIRARDPVAMFLYAIVVSVCAPVWEEIVFRGFLLPSLTKYMPVWCAILVSSIAFALAHFNIQRMLPLMFLGMVMGVIFTRSRNLLPSMLLHSLWNGFVFLDLMK 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0403 349 Pfam Type II CAAX prenyl endopeptidase Rce1-like 256 341 IPR003675 GO:0004222|GO:0016020|GO:0071586
Lal23g0403 349 PANTHER - 47 347 - -
Lal23g0403 349 PANTHER CAAX AMINO TERMINAL PROTEASE 47 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0403 Lal-Chr23 6414550 6421891 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0403 K07052 - gmx:100816897 587.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0403 23 6414550 6421891 Lal23g0403 23 6414550 6421891 ECH
Lal16g1177 16 8059987 8065900 Lal23g0403 23 6414550 6421891 LSH