Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1177 ATGTTGAGTACCTCTTCTTCTTACTCTCTCTTTCCTCACCCCTTTCTTCCAATTAAGCTTTCTCATCCTGCCACCACATTACAACACCCTTTCTCTCGCACTTTTTGGCTCTTTCAATCTAATCCTAGCTCTTCCAATAACAAATTGAGTATTTCATGCTTTAGGCATGAACATCATTCTCCAGAAAGTCCCAAACCTGAAATCATAGACCAATATCTTCCCGAGAAGTTGGTACAATCTGAATTCAATAACTCTAGTGTCTCTAAAAGCAACTGGAACTCAAGCCTCAAGAAGGCTGCAAATGAAGTATTCAAGGTATTTGGCAAACGATGGGTTGTACCATGGAATGCAATGACCATATTACAAGTTATGCTTCTTTGGACAACTGCATTTTGGTGTATAGGATCTTGGATGATTCCTTTTGCAGTTCATATAACTGGGTTTAACAAGGAATCTTTGACGCTTAGAGGGCAAGCACTATTTAGCCTTGTTATTGATGTAACCGAAGGAATTGCCGGAATTGCAATTCTTCTTCGTTGTCTTTCTCGATTTCGCCCCCTTCCACCTGACTGGTTCAAGTTTAGCCTGAAAGGGAATTGGCCAATAGATGTCATCCTGGGATGTCTCATGTTTCCTCTTGTAAATCGGCTCTCACAGTTCAACCTAGATCTACTACCTCTTTTACCCTCTACACCTGTCACCTTTTCAAGTGTTGAGCAATCAATAAGAGCAAGGGATCCCGTGGCAATGTTTTTATATGCAATAGTAGTATCAGTATGTGCTCCTGTGTGGGAGGAGATAGTTTTCCGTGGCTTTCTACTCCCATCACTTACCAAATACATGCCGGTGTGGTGTGCAATACTGGTAAGTTCAATTGCCTTTGCACTTGCACATTTTAATATACAGAGGATGCTGCCACTTATATTTCTTGGGATGGTGATGGGTGTTATATTTACAAGGTCAAGGAATTTACTGCCATCAATGCTATTGCATAGTCTATGGAATGGCTTTGTCTTCCTAGACTTGATGAAATAG 1035 0.4087 MLSTSSSYSLFPHPFLPIKLSHPATTLQHPFSRTFWLFQSNPSSSNNKLSISCFRHEHHSPESPKPEIIDQYLPEKLVQSEFNNSSVSKSNWNSSLKKAANEVFKVFGKRWVVPWNAMTILQVMLLWTTAFWCIGSWMIPFAVHITGFNKESLTLRGQALFSLVIDVTEGIAGIAILLRCLSRFRPLPPDWFKFSLKGNWPIDVILGCLMFPLVNRLSQFNLDLLPLLPSTPVTFSSVEQSIRARDPVAMFLYAIVVSVCAPVWEEIVFRGFLLPSLTKYMPVWCAILVSSIAFALAHFNIQRMLPLIFLGMVMGVIFTRSRNLLPSMLLHSLWNGFVFLDLMK 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1177 344 PANTHER CAAX AMINO TERMINAL PROTEASE 44 342 - -
Lal16g1177 344 PANTHER - 44 342 - -
Lal16g1177 344 Pfam Type II CAAX prenyl endopeptidase Rce1-like 251 336 IPR003675 GO:0004222|GO:0016020|GO:0071586
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1177 Lal-Chr16 8059987 8065900 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1177 K07052 - gmx:100816897 557.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1177 16 8059987 8065900 Lal16g1177 16 8059987 8065900 ECH
Lal16g1177 16 8059987 8065900 Lal23g0403 23 6414550 6421891 LSH