Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0340 ATGGTTCAAATCCCACATATATCAGATTCTAACATAGTCACCATCAATGTGGGTGGCCAACTTTTCCAAACAACGAAACAAACCCTAACCTCAGCGGGTCCCAAAACCTTGTTCTCTCGCATAAACGACGCCGTTTCAATCTCTCCACTATATACCCCTTTCGTTGATCGAGACCCTGAAATCTTCTCTCTCTTCCTCTCTCTCCTGCGAACCGGTAACATTCCCTCAAAGGCTAAATCCTTCGACGTTCAAGACCTAATCCAAGAATCCAAATTCTACGGCATCGAAAAACTCCTCATTGATTCACTTTCCAACCCTTCACAATTCGAACCATTCAATCTCCAAAAATCCCTAATTCTACCCTTGAATGGACGCGATTCTGCGTCTGTAATCTCCACCACACGCTACGGTTCTCTCCACGTCGCGCACGGCAGTAAAATTACCTCCTTCCAGTGGTCCCTCCGCCGGAAATCCACTGTCCTAACACACTTCACCGCCGTCGATTCGTTATTAGCAATCTCGCCGTCGCTCGCCGCGGCCGGCGCCAACGACTTCTCCGGGTTACAAATCATCGATTTAGAAAACGGAGTCGTGAAGGAAACGCTAAATTGGGAAAACGTAACCCGGTCTGGTTCGACGGTTCAGGCTATAGGTTCCGGACCGGATCAATTATTCACGAGCTTCGAGTCTTCTAGAAGGAACTCGAATTCGATCGTGGTTTACGACTTGCAAAGCTTGAAACCCGTTTCAGAGATCAGCCACAACGAGATTTTCGGCGCCAACATCGGTTCCGCTATTCCCGCCACGAAGCTTCAATGGCTGAACGGTTACAACCTTTTGATGGCTTCTGGGTCCCACAGTGGGCCCTCCGGTGTTAACGGTAACGTCCGATTGTGGGATGTTAGGTCTGGGAACTTGGTTTGGGAGATGACGGAGAAGGTTGATTGTTTTGCTGACGTGGCAGTATCGGATTCGCTTTCGGTTATTTTCAAGGTTGGGGTGAATTCGGGTGAGGCTTCTTATGTTGATATGCGTAATTTGTGTGATAAGAATGAATGGATGTGTGTTGGTGATAAGAGGAAAGTGGTTAATGGGAAAAGGGAAGGGTATGGATGTAAAATTGAGACACAAGGGAATCATGTGTTTTGTACAAAGGGTGGGGATGTAGAGTTATGGTCTGAGGTTATAATGGGAAATGGGAAAAAGAGTAGTATCATTAGGGAAGGTGTATTGGTGGATGATAGGATATTCAAGAAGAACTTGATGGGGAGAGTGAAAGATATGGGAGGTGCTAAGATTACTAATTTGTCCTTTGGAGGGAGCAGAATGTTCTTGACAAGGAAGGATCAACAATGTGTTGAGGTCTGGCATGGTTCTTCTAGGGAACTTTAA 1392 0.4641 MVQIPHISDSNIVTINVGGQLFQTTKQTLTSAGPKTLFSRINDAVSISPLYTPFVDRDPEIFSLFLSLLRTGNIPSKAKSFDVQDLIQESKFYGIEKLLIDSLSNPSQFEPFNLQKSLILPLNGRDSASVISTTRYGSLHVAHGSKITSFQWSLRRKSTVLTHFTAVDSLLAISPSLAAAGANDFSGLQIIDLENGVVKETLNWENVTRSGSTVQAIGSGPDQLFTSFESSRRNSNSIVVYDLQSLKPVSEISHNEIFGANIGSAIPATKLQWLNGYNLLMASGSHSGPSGVNGNVRLWDVRSGNLVWEMTEKVDCFADVAVSDSLSVIFKVGVNSGEASYVDMRNLCDKNEWMCVGDKRKVVNGKREGYGCKIETQGNHVFCTKGGDVELWSEVIMGNGKKSSIIREGVLVDDRIFKKNLMGRVKDMGGAKITNLSFGGSRMFLTRKDQQCVEVWHGSSREL 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0340 463 SUPERFAMILY POZ domain 10 102 IPR011333 -
Lal23g0340 463 Gene3D - 122 463 IPR015943 GO:0005515
Lal23g0340 463 Pfam BTB/POZ domain 13 102 IPR003131 GO:0051260
Lal23g0340 463 Gene3D Potassium Channel Kv1.1; Chain A 1 108 IPR011333 -
Lal23g0340 463 PANTHER BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER 8 461 IPR045068 -
Lal23g0340 463 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 180 394 IPR011047 -
Lal23g0340 463 SMART BTB_4 11 110 IPR000210 GO:0005515
Lal23g0340 463 PANTHER PROTEIN BINDING PROTEIN 8 461 - -
Lal23g0340 463 CDD BTB_POZ_KCTD-like 13 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0340 Lal-Chr23 4385543 4386934 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0340 - - gmx:100797171 722.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1395 15 16131694 16133088 Lal23g0340 23 4385543 4386934 LSH