Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1395 ATGCCACCCTTTGCAGGTGAAGGTGTTATTCAATTCCAACCAAAATCAGATTCTAACATAGTAACTATAGACGTAGGTGGACAACTTTTCCAAACAACTAAACAGACACTCACCTCGTCTGGAACCAAAACCTTCTTTTCTCGAATTTGCGACGCCGCTTCGGCCTCGCCATTCCACACCCCTTTCGTTGACCGTGACCCTGAAATCTTCTCCCTCCTCCTCTCTCTCCTCCGCACCGGAAACCTTCCCTCCAAGGCTAAATCCTTCGACCTTCAAGATCTTATTCAAGAATCTAGATTCTATGGAATTGAGAAACTTCTCATTGATTCACTCTCCAATCCTTCGCAATTTGAACCTTTCAATCTTCATAGATCGTTGATATTACCATTGAACGGACGCGATTCCCCTTCCGCAATCGCCACCACAAGATACGGTTCCGTCCATGTTGCTCACGGCAGCAAAATCACCTCATTCGATTGGTCCCTCCGCCGGAAATCCACCGTCCTAACGCAATTCACCGCCGTGGATTCGTTACTAGCAATCTCGCCGTCGATCGCCGCCGCCGGAGCCAACGATTTTTCCGGTTTGCAGATCCTAGATCTCGAAAACGGAACCGTTAGGGAAACGCTAAATTGGGAGAATGTGACCCGGTCCGGTTCGACCGTTCAAGCAATCGGGTCTGGACCGGGTCAATTATTCGCAAGCTTCGAATCTTCTAGAAGAAACTCGAACTCAATAATCGTCTACGATTCCCAAACCCTAAAACCCGTTTCGGAGATTAGCCACAACGAGATTTTCGGCGCCGACATTGGTTCCGCTATTCCCGCCACAAAGCTAGAATGGGTAAACGGTTACAACCTCTTAATGGCATGTGGGTCCCACAGCGGGCCATCCGGTGTTAACGGATACCTACGCCTGTGGGATGTTAGGTCCGGGAACATGGTTTGGGACATAAACGAAAAGGTCGATTGTTTTGCTGATGTGTCAGTATCCGATTCGATGTCGGCTATTTTCAAAGTAGGGGTAAATTCAGGCGAGGTATCTTACGTTGATTTGAGGAATTTGAGTGAAGGGAATGAATGGGTGTGTATTGGTGATAAGAGGAAAGTGATTAATGGGAAAAAAGAAGGAAAAGAGTGTAAAATAGAGGCACAAGGGAATCAAGTTTTTTGCACAAAGGGTGGTGATGTGGAATTATGGTCTGAGGTTATAATGGGAAATAATGGGTTAATGGAGAATAAGAAGAGAATATTAAAGAAGAATTTGATGGGAAGAGTTAAGGATATGGGTGGTGTTAGGATTAATAATATGGCATTTGGAGGAAGTAGAATGTTCTTGACAAGAAAGGATCAACAATGTGTTGAGGTTTGGCAAGGGTCTTCTAGGGAGCTTTAA 1395 0.4552 MPPFAGEGVIQFQPKSDSNIVTIDVGGQLFQTTKQTLTSSGTKTFFSRICDAASASPFHTPFVDRDPEIFSLLLSLLRTGNLPSKAKSFDLQDLIQESRFYGIEKLLIDSLSNPSQFEPFNLHRSLILPLNGRDSPSAIATTRYGSVHVAHGSKITSFDWSLRRKSTVLTQFTAVDSLLAISPSIAAAGANDFSGLQILDLENGTVRETLNWENVTRSGSTVQAIGSGPGQLFASFESSRRNSNSIIVYDSQTLKPVSEISHNEIFGADIGSAIPATKLEWVNGYNLLMACGSHSGPSGVNGYLRLWDVRSGNMVWDINEKVDCFADVSVSDSMSAIFKVGVNSGEVSYVDLRNLSEGNEWVCIGDKRKVINGKKEGKECKIEAQGNQVFCTKGGDVELWSEVIMGNNGLMENKKRILKKNLMGRVKDMGGVRINNMAFGGSRMFLTRKDQQCVEVWQGSSREL 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1395 464 PANTHER PROTEIN BINDING PROTEIN 15 462 - -
Lal15g1395 464 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 183 400 IPR011047 -
Lal15g1395 464 Gene3D Potassium Channel Kv1.1; Chain A 12 114 IPR011333 -
Lal15g1395 464 Gene3D - 135 464 IPR015943 GO:0005515
Lal15g1395 464 SMART BTB_4 19 118 IPR000210 GO:0005515
Lal15g1395 464 CDD BTB_POZ_KCTD-like 21 101 - -
Lal15g1395 464 Pfam BTB/POZ domain 21 110 IPR003131 GO:0051260
Lal15g1395 464 PANTHER BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER 15 462 IPR045068 -
Lal15g1395 464 SUPERFAMILY POZ domain 18 109 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1395 Lal-Chr15 16131694 16133088 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1395 - - gmx:100797171 726.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1395 15 16131694 16133088 Lal15g1395 15 16131694 16133088 ECH
Lal15g1395 15 16131694 16133088 Lal23g0340 23 4385543 4386934 LSH