Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0281 ATGTGCAAGTTATTATCATCAAGTTCTATTTCACATGAAAGCAATGAGGATAACCCAAATACATCGATAATTAACGTAGAAGATAATTCCAACTTGTTAACACCATTGATCCACAAACCATCATCATCTGAACCCGAAATTCAAAATCCGAACAAAATCAATTTCTCGATTTACCTTAGTGAAACAAAGTGCATAGCGAACATAGCATTGCCTATGATATTAAGTGGCATATTACTCTATGCACGCTCTATGATCTCTATGATTTTCCTTGGCCACCTTGGTGACCTTGCTTTAGCTGGTGGGTCTTTAGCCATTGGATTTGCCAATATCACTGGATACTCTATTCTTTCTGGTCTTGCCAATGGAATGGAACCAATCTGTGGTCAAGCTTTTGGAGCCAATCGATTCAATCTCCTTGGCCTCGTGATGCAAAGAATGGTGCTTCTACTTCTTCTTACTTCAGTTTTTATATCATTCTTATGGATCAACATGAAGAAAATATTGATATTTTTTGGTCAAGAAAAAGATATAGCCAGTGAAGCTCAATTTTACTTAATCTATTGTATCCCTGATCTCATAATACAATCACTTCTACACCCTTTGCGTATCTACCTTCGAAGCCAATCTATAACCCTTCCTTTAACATATTGTGCTGCTCTTTCTATTATTCTTCACCTTCCTATCAATTATCTTCTCGTTATTGTTCTCAAGCTTGGAACCAAAGGCGTCGCTTTAGCCGTTATTTGGACACACTTCAATGTCGTGGCTTCATTGATAATGTACATCATAATTTCAGGTGTACATAGTAAAACATGGGGTGGGTTTTCTTATGCATGTTTCAAAGGTTGGAAGGTATTATTAAATCTTGCAATTCCAAGTTGCATTTCAGTTTGCCTTGAATGGTGGTGGTATGAAATCATGATTTTATTATGTGGGTTATTAGCTAATCCTAATGCTAGTGTTGCATCAATGGGGGTTTTGATTCAAACAACTTCATTAATATACATTTTCCCACACTCATTAAGCTTTGGGGTGTCAACAAGGGTTGGAAATGAGTTAGGAGCAGAAAATCCTCAAAGAGCAAAACTTGCAGCAAGAATAGGAGTGTGCTTTAGTTTTCTGTTAGGAGTCTTGGCTTTAGGTTTTACCTTTTCAGTGAGGAATGTTTGGTCTACCATGTTCACAAATGATGCAAAAATCATTACTTTGACATCTACTGTGTTACCTATTGTTGGTGCTTGTGAACTTGGAAATTGTCCACAAACAACTGTTTGTGGAGTTTTAAGGGGAACCGCAAGGCCAAAATTTGGTGCAAATATAAACTTAGGTTGTTTCTATCTTGTAGGAATGCCCATTGCAGTGTGGTTGAGTTTCTTTGCAGGTTTTGATTTCAAAGGTTTGTGGCTAGGTTTATTAGCAGCACAATTCTCTTGTATGATAACTATGCTATTTGTGTTGGCTAGAACAGATTGGGAAGGTCAAGCACAAAGAGCTAAGGAACTTACATCATGTGATGCTAATGAAGAAGCAAAATTAGAGGAATAG 1545 0.3715 MCKLLSSSSISHESNEDNPNTSIINVEDNSNLLTPLIHKPSSSEPEIQNPNKINFSIYLSETKCIANIALPMILSGILLYARSMISMIFLGHLGDLALAGGSLAIGFANITGYSILSGLANGMEPICGQAFGANRFNLLGLVMQRMVLLLLLTSVFISFLWINMKKILIFFGQEKDIASEAQFYLIYCIPDLIIQSLLHPLRIYLRSQSITLPLTYCAALSIILHLPINYLLVIVLKLGTKGVALAVIWTHFNVVASLIMYIIISGVHSKTWGGFSYACFKGWKVLLNLAIPSCISVCLEWWWYEIMILLCGLLANPNASVASMGVLIQTTSLIYIFPHSLSFGVSTRVGNELGAENPQRAKLAARIGVCFSFLLGVLALGFTFSVRNVWSTMFTNDAKIITLTSTVLPIVGACELGNCPQTTVCGVLRGTARPKFGANINLGCFYLVGMPIAVWLSFFAGFDFKGLWLGLLAAQFSCMITMLFVLARTDWEGQAQRAKELTSCDANEEAKLEE 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0281 514 MobiDBLite consensus disorder prediction 1 24 - -
Lal23g0281 514 Pfam MatE 292 455 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lal23g0281 514 Pfam MatE 71 231 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lal23g0281 514 TIGRFAM matE: MATE efflux family protein 71 468 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lal23g0281 514 CDD MATE_eukaryotic 61 497 IPR045069 GO:0042910|GO:1990961
Lal23g0281 514 PANTHER PROTEIN DETOXIFICATION 49 52 505 - -
Lal23g0281 514 PANTHER MULTIDRUG RESISTANCE PROTEIN 52 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0281 Lal-Chr23 2886732 2888276 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0281 K03327 - gmx:100778250 706.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0281 23 2886732 2888276 Lal23g0281 23 2886732 2888276 ECH
Lal14g1429 14 15523981 15529942 Lal23g0281 23 2886732 2888276 LSH