Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0254 ATGGGCAAAGTTTATCCTCAAGTATCCACATCCTCTCCATGCTTCAATTCTAAAAGAGAAACATATACTCTATGGATGAAATCACTTGTGTTCCACTCTAATGGTTGCACTGTCTATGATTCTAATGGTGACATAGTTTACCGAGTTGATAACTATGATAGAAAGGGTAAAAGTGAAGTTAACCTCATGGATCTAAAAGGAAGAGTTCTTTGTGCCATAAAGAAGAAATCTCTATCTTTTGGAAGTTGGAGTGGTTACAGATGCAATAGTCCTAGTTATGGAAGCATGAAGGAGCCATGGTTTCAAGTGAAAAGATGTAATAAAATGATAAGAAGGAAAGTAGAATGTGAAATAGAAATTGAGTGCCAAAAGTACTGCATATTGAGAAATAGTGGCAAAGCAGCTTTCAGGATAGTAAACGTTGATGGACATATAGTTGCAGAGGCAAAGAAAAAATACTCACCCTCTGGTGTTGCATTGGATAATGATGTTTTAACATTGGATGTGGCTGAAGACACAGATCATTCCCTTGTGATGGCTTTAGTCACAGTTTATGGATTGATATGTGGTAGAATGTAA 579 0.3661 MGKVYPQVSTSSPCFNSKRETYTLWMKSLVFHSNGCTVYDSNGDIVYRVDNYDRKGKSEVNLMDLKGRVLCAIKKKSLSFGSWSGYRCNSPSYGSMKEPWFQVKRCNKMIRRKVECEIEIECQKYCILRNSGKAAFRIVNVDGHIVAEAKKKYSPSGVALDNDVLTLDVAEDTDHSLVMALVTVYGLICGRM 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0254 192 Pfam LURP-one-related 8 184 IPR007612 -
Lal23g0254 192 PANTHER - 2 191 IPR007612 -
Lal23g0254 192 SUPERFAMILY Tubby C-terminal domain-like 9 189 IPR025659 -
Lal23g0254 192 PANTHER PROTEIN LURP-ONE-RELATED 4 2 191 - -
Lal23g0254 192 Gene3D - 11 191 IPR038595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0254 Lal-Chr23 2519086 2520542 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0254 - - pvu:PHAVU_002G287800g 298.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0254 23 2519086 2520542 Lal23g0254 23 2519086 2520542 ECH
Lal16g1224 16 8532192 8533428 Lal23g0254 23 2519086 2520542 LSH
Lal15g1381 15 15976651 15978470 Lal23g0254 23 2519086 2520542 LSH
Lal15g0070 15 490295 491297 Lal23g0254 23 2519086 2520542 PCT