Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1224 ATGTCTAAGGTTTATCCACAGGAATCAACATCCTCTACTTGCCTCAATTCCAAAAGAGAAACATATACTCTATGGATGAAGTCACTTGTATTTCACTCTAATGGTTGCACTGTTTATGATTCAAATGGTGACATAGTTTACCGAGTTGATAACTATGATAGAAAGGGTAAAAGAGAAGTTAACCTTATGGATCTAAGAGGTAGAGTTCTATGTGTTATAAAGAAGAAATTACTAGCTTTTGGAAGTTGGGATGGCTACAAAAGTAACAGTTCTAGTTGTGGAAGCATGGAGGAGCCATGGTTTCAAGTGAAAAGATGTAACAAAATAGGGAAAGAAGCATGTGAGATTAAAGTGGGGTGCCAGAAATACTGCATAGTGAGAACTATTGGCAAAGTAGCATTCATGATAGTAAACACTGATGGACATATAGTTGCAGAGGCAAAGCAAAAGTACTCTCCTTCTGGTGTTTCATTGGATAATGATGTTTTAACCTTGGATGTGGCTGCAGACACAGATCATTCACTTGTAATGGCTTTAGTCACAGTGTATGGATTGATATGTGGTAGAATGTAA 573 0.3717 MSKVYPQESTSSTCLNSKRETYTLWMKSLVFHSNGCTVYDSNGDIVYRVDNYDRKGKREVNLMDLRGRVLCVIKKKLLAFGSWDGYKSNSSSCGSMEEPWFQVKRCNKIGKEACEIKVGCQKYCIVRTIGKVAFMIVNTDGHIVAEAKQKYSPSGVSLDNDVLTLDVAADTDHSLVMALVTVYGLICGRM 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1224 190 PANTHER - 2 189 IPR007612 -
Lal16g1224 190 PANTHER PROTEIN LURP-ONE-RELATED 4 2 189 - -
Lal16g1224 190 Gene3D - 11 189 IPR038595 -
Lal16g1224 190 SUPERFAMILY Tubby C-terminal domain-like 11 187 IPR025659 -
Lal16g1224 190 Pfam LURP-one-related 9 182 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1224 Lal-Chr16 8532192 8533428 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1224 - - pvu:PHAVU_002G287800g 292.737
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1224 16 8532192 8533428 Lal16g1224 16 8532192 8533428 ECH
Lal16g1224 16 8532192 8533428 Lal15g1381 15 15976651 15978470 LSH
Lal16g1224 16 8532192 8533428 Lal23g0254 23 2519086 2520542 LSH
Lal15g0070 15 490295 491297 Lal16g1224 16 8532192 8533428 PCT