Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0251 ATGGTTTGTACTTCAACAAATCGCATCTTCTTCACTCTGTTCAGCAGAAACAGAACAACAACAACAAGAATTGTTGTTCCTCTTTTTTCTTCTCTTCACTCCTTCTCCTCCAATTTCTCAAACCCCAATCATATTTCATTATGTACTTTTCCCATTAAACCCAAAATTGGTTTTCCAATTTCCAAACCAAAATCTTTGTGTTTCTCTTTCAGAACAGATCACACAATGGCTACCCCATCAAACTCCAATTCACTCCATGACTTCACTGTTAAAGATGCTAAGGGAAATGATGTTAATCTTGGTGACTATAAGGGAAAAGTCCTTATTATTGTCAATGTTGCCTCACAATGTGGCTTGACTAACTCCAATTACACAGAGCTGAATCAGCTATATGAGAAATACAAAGGGAAAGGTCTTGAAATTCTGGCATTCCCTTGTAACCAGTTTGGGGGTCAAGAGCCTGGATCTAACGAGCAGATAGTAGAGTTTGCTTGTACTCGCTTCAAAGCCGAGTTTCCCATTTTCGACAAGGTGGATGTGAATGGTGACACTGCAGCTCCAATCTATAAGTTTCTAAAATCAAGGAAAGGTGGGCTCTTAGGAGATAACATAAAGTGGAACTTCTCCAAGTTCCTTGTTGATAAAAATGGGAATGTTGTTGAACGTTATGCACCAACAACTTCTCCACTAAGCATTGAGAAGGACTTGCAGAAGCTGTTGGATGCATGA 729 0.3937 MVCTSTNRIFFTLFSRNRTTTTRIVVPLFSSLHSFSSNFSNPNHISLCTFPIKPKIGFPISKPKSLCFSFRTDHTMATPSNSNSLHDFTVKDAKGNDVNLGDYKGKVLIIVNVASQCGLTNSNYTELNQLYEKYKGKGLEILAFPCNQFGGQEPGSNEQIVEFACTRFKAEFPIFDKVDVNGDTAAPIYKFLKSRKGGLLGDNIKWNFSKFLVDKNGNVVERYAPTTSPLSIEKDLQKLLDA 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0251 242 ProSiteProfiles Glutathione peroxidase profile. 75 242 IPR000889 GO:0004602|GO:0006979
Lal23g0251 242 PRINTS Glutathione peroxidase family signature 103 120 IPR000889 GO:0004602|GO:0006979
Lal23g0251 242 PRINTS Glutathione peroxidase family signature 139 155 IPR000889 GO:0004602|GO:0006979
Lal23g0251 242 PRINTS Glutathione peroxidase family signature 204 213 IPR000889 GO:0004602|GO:0006979
Lal23g0251 242 PANTHER GLUTATHIONE PEROXIDASE 21 242 IPR000889 GO:0004602|GO:0006979
Lal23g0251 242 Gene3D Glutaredoxin 76 242 - -
Lal23g0251 242 ProSitePatterns Glutathione peroxidases active site. 105 120 IPR029759 -
Lal23g0251 242 CDD GSH_Peroxidase 84 236 IPR000889 GO:0004602|GO:0006979
Lal23g0251 242 ProSiteProfiles Thioredoxin domain profile. 79 242 IPR013766 -
Lal23g0251 242 PANTHER GLUTATHIONE PEROXIDASE 21 242 - -
Lal23g0251 242 Pfam Glutathione peroxidase 85 193 IPR000889 GO:0004602|GO:0006979
Lal23g0251 242 ProSitePatterns Glutathione peroxidases signature 2. 142 149 IPR029760 -
Lal23g0251 242 SUPERFAMILY Thioredoxin-like 84 241 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0251 Lal-Chr23 2427879 2432595 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0251 K00432 - gmx:100306295 327.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0251 23 2427879 2432595 Lal23g0251 23 2427879 2432595 ECH
Lal16g1217 16 8476854 8479576 Lal23g0251 23 2427879 2432595 LSH