Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1217 ATGACCACCGATTCAACCAACGATCCAACCTCTATATACGATTTCACTGTCAAGGACTCTAATGGTAATGATGTTGATCTTGCCATTTATAAGGGCAAAGTTCTTTTGATTATTAATGTTGCTTCCAAATGTGGCTTGACCAACTCAAACTATGCAGAGTTGAATCAATTATATGACAAGTATAAAGACAAAGGCTTAGAGATTCTAGCCTTTCCGTGTAATCAATTTGGTGAGGAAGAACCCGGCAGCAATGATCAAATTGTGGACTTCGTCTGCACTCGCTTCAAATCAGAATTCCCCATCTTTGATAAGATTGAAGTGAATGGGGATAATTCTATTCCTTTGTATAAATTCTTGAAGACAGCTAAATGGGGAATTTTTAAGGATGATATCCAGTGGAACTTCGCCAAGTTTCTGGTTGACAGGGATGGACAAGTAGTGGATCGCTATTATCCGACAACTTCTCCTCTCAGTGCTGAGCAAGACATCCGAAAGTTACTAGGTGTTGTGTGA 513 0.3957 MTTDSTNDPTSIYDFTVKDSNGNDVDLAIYKGKVLLIINVASKCGLTNSNYAELNQLYDKYKDKGLEILAFPCNQFGEEEPGSNDQIVDFVCTRFKSEFPIFDKIEVNGDNSIPLYKFLKTAKWGIFKDDIQWNFAKFLVDRDGQVVDRYYPTTSPLSAEQDIRKLLGVV 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1217 170 Gene3D Glutaredoxin 1 169 - -
Lal16g1217 170 PRINTS Glutathione peroxidase family signature 30 47 IPR000889 GO:0004602|GO:0006979
Lal16g1217 170 PRINTS Glutathione peroxidase family signature 66 82 IPR000889 GO:0004602|GO:0006979
Lal16g1217 170 PRINTS Glutathione peroxidase family signature 131 140 IPR000889 GO:0004602|GO:0006979
Lal16g1217 170 PANTHER GLUTATHIONE PEROXIDASE 8-RELATED 1 169 - -
Lal16g1217 170 ProSiteProfiles Thioredoxin domain profile. 6 170 IPR013766 -
Lal16g1217 170 ProSitePatterns Glutathione peroxidases active site. 32 47 IPR029759 -
Lal16g1217 170 ProSiteProfiles Glutathione peroxidase profile. 2 170 IPR000889 GO:0004602|GO:0006979
Lal16g1217 170 Pfam Glutathione peroxidase 12 120 IPR000889 GO:0004602|GO:0006979
Lal16g1217 170 SUPERFAMILY Thioredoxin-like 10 167 IPR036249 -
Lal16g1217 170 PIRSF Glutathion_perox 1 169 IPR000889 GO:0004602|GO:0006979
Lal16g1217 170 CDD GSH_Peroxidase 11 163 IPR000889 GO:0004602|GO:0006979
Lal16g1217 170 ProSitePatterns Glutathione peroxidases signature 2. 69 76 IPR029760 -
Lal16g1217 170 PANTHER GLUTATHIONE PEROXIDASE 1 169 IPR000889 GO:0004602|GO:0006979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1217 Lal-Chr16 8476854 8479576 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1217 K00432 - gmx:100808523 298.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1217 16 8476854 8479576 Lal16g1217 16 8476854 8479576 ECH
Lal16g1217 16 8476854 8479576 Lal23g0251 23 2427879 2432595 LSH