Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0247 ATGAGGTACTCTCGATTATTCTCAAATCTCCACAAAACCCTAATCCAAACCCTAAATTCACCATTCCCAAAACCCCAATCATTTTCCCCTTTCACTCGCAATTACGGCGCCGTTTCGCAAAATTCAAATCTCTCTTCGATCGTAGACGAACTTTCTTGTCTAACCCTTTTGGAAGTGATGGATTTGGTTGAAGTAATGCGAGAGAAGAAAGGAATCACTGAGCTTCCACTTATGATGCTTATGACCCCTGGAATGGGGTTAAGGGTTTCGCCGAAGGGTAATGCAAGTAGTAGTGGTGGTGGAGGGAAAGTTGAAGAGAAGAAGGTTGAGAAAACTGCATTTGATGTTAAGCTTGATGCTTTCGATGCCGCGTCGAAGATTAAGGTTATTAAAGAAGTTAGGACTTTTACTAGCTTGGGGTTGAAGGAAGCTAAGGATTTGGTGGAGAAGGTGCCGAGTGTTTTGAAGAAAGGCGTGACGAAGGAAGAAGCCGAGAGTATTATTGCAAAGATGAAGGAGGTTGGAGCTAAAGTTTCAATGGAATAA 546 0.4267 MRYSRLFSNLHKTLIQTLNSPFPKPQSFSPFTRNYGAVSQNSNLSSIVDELSCLTLLEVMDLVEVMREKKGITELPLMMLMTPGMGLRVSPKGNASSSGGGGKVEEKKVEKTAFDVKLDAFDAASKIKVIKEVRTFTSLGLKEAKDLVEKVPSVLKKGVTKEEAESIIAKMKEVGAKVSME 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0247 181 Hamap 50S ribosomal protein L7/L12 [rplL]. 37 181 IPR000206 GO:0003735|GO:0005840|GO:0006412
Lal23g0247 181 PANTHER 39S RIBOSOMAL PROTEIN L12 26 181 IPR000206 GO:0003735|GO:0005840|GO:0006412
Lal23g0247 181 Pfam Ribosomal protein L7/L12 C-terminal domain 114 180 IPR013823 GO:0003735|GO:0006412
Lal23g0247 181 SUPERFAMILY Ribosomal protein L7/12, oligomerisation (N-terminal) domain 44 116 IPR036235 GO:0003735|GO:0005840|GO:0006412
Lal23g0247 181 TIGRFAM L12: ribosomal protein bL12 44 180 IPR000206 GO:0003735|GO:0005840|GO:0006412
Lal23g0247 181 SUPERFAMILY ClpS-like 110 180 IPR014719 -
Lal23g0247 181 Gene3D - 111 180 IPR014719 -
Lal23g0247 181 Gene3D Single helix bin 44 110 IPR036235 GO:0003735|GO:0005840|GO:0006412
Lal23g0247 181 Pfam Ribosomal protein L7/L12 dimerisation domain 45 81 IPR008932 GO:0003735|GO:0005840|GO:0006412
Lal23g0247 181 CDD Ribosomal_L7_L12 43 180 IPR000206 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0247 Lal-Chr23 2366053 2369775 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0247 K02935 - gmx:100783589 184.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1489 15 17050526 17054085 Lal23g0247 23 2366053 2369775 LSH