Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1489 ATGATTCATTCACGATTTTTCTCACTTCTTCACAAAACCCTAACCCACAAATCACCATTTCCAATTCCACAATCTCTTTCGATCTTCACTCACAAATACGGCACCGTTTCACAAGATTCAAATCCATCCATTGTTCAATCAGATAATGTCTCTGCGATCGTTGATGAACTCACACGATTGACGCTTCTCGAAGTGATGGATTTGGTGGAAGTGATGCGTGAGAAGAAAGGAATCACTGAGCTTCCACTTATGATGCTTATGACCCCTGGAATGGGAATTAGGGTTCCGCCGAAGGGTGTAGGAGTAGGAGGAGGGAAAATTGAAGAGAAGAAGGTTGAGAAAACTGCGTTTGATGTTAAACTTGATGCATTCGATGTCGCGTCGAAGATTAAGGTTATTAAGGAAGTGAGGACATTTACTAGCTTGGGATTGAAGGAAGCTAAGGATTTGGTGGAGAAGGTTCCTACTGTTTTGAAGAAAGGCGTGACAAAGGAGGAAGCCGAGAGCATTATTGCGAAGATGAATGCGGTTGGCGCAAAAGTTTCGATGGAATAA 555 0.427 MIHSRFFSLLHKTLTHKSPFPIPQSLSIFTHKYGTVSQDSNPSIVQSDNVSAIVDELTRLTLLEVMDLVEVMREKKGITELPLMMLMTPGMGIRVPPKGVGVGGGKIEEKKVEKTAFDVKLDAFDVASKIKVIKEVRTFTSLGLKEAKDLVEKVPTVLKKGVTKEEAESIIAKMNAVGAKVSME 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1489 184 CDD Ribosomal_L7_L12 49 183 IPR000206 GO:0003735|GO:0005840|GO:0006412
Lal15g1489 184 PANTHER 39S RIBOSOMAL PROTEIN L12 29 184 IPR000206 GO:0003735|GO:0005840|GO:0006412
Lal15g1489 184 Hamap 50S ribosomal protein L7/L12 [rplL]. 43 184 IPR000206 GO:0003735|GO:0005840|GO:0006412
Lal15g1489 184 Pfam Ribosomal protein L7/L12 C-terminal domain 117 183 IPR013823 GO:0003735|GO:0006412
Lal15g1489 184 SUPERFAMILY ClpS-like 113 183 IPR014719 -
Lal15g1489 184 Pfam Ribosomal protein L7/L12 dimerisation domain 50 87 IPR008932 GO:0003735|GO:0005840|GO:0006412
Lal15g1489 184 TIGRFAM L12: ribosomal protein bL12 51 183 IPR000206 GO:0003735|GO:0005840|GO:0006412
Lal15g1489 184 Gene3D - 111 183 IPR014719 -
Lal15g1489 184 SUPERFAMILY Ribosomal protein L7/12, oligomerisation (N-terminal) domain 50 119 IPR036235 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1489 Lal-Chr15 17050526 17054085 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1489 K02935 - gmx:100775592 182.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1489 15 17050526 17054085 Lal15g1489 15 17050526 17054085 ECH
Lal15g1489 15 17050526 17054085 Lal23g0247 23 2366053 2369775 LSH