Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g1398 ATGGAGAGTTATGAAGCTATCAAGAACATTGATGAAGATGAAGATGTGGAAATGGGACATCAACATAAGCAGCAGATCTATGAATCAAGATCTGTTATCAACAATGTTGAGTCACCAACATCTTTTACTTCAATTTCAACAAAACAACAACCTCAAACCCAACAACGTCTTCTTTCCCTTGATGTCTTCCGTGGTTTCACTGTACTGCTGATGATACTGGTGGATGAAGCTGGTGGACTCGTTCCCGCGCTAAATCATTCTCCATGGAATGGTTTAACACTAGCAGATTTTGTCATGCCATTTTTCCTTTTTATTGTTGGTGTTTCACTTGCACTCGCATATAAGAAGCTATCTTCCAGAGTTGTTGCATCTAGAAATGCATTTTTACGGGCTCTTAAACTCCTCGCATTAGGCCTTTTTCTTCAAGGAGGTTATTTTCATCGTCTCGGTGATCTGACATTTGGAGTGGATCTTAAGCAGTTAAGATGGATGGGAATACTGCAGAGAATCGCAATAGCATATTTGCTTACAGCATTGTGTGAAATTTGGCTCAAGGCCGATGAGACTGTTAATTCAGGATCGTCTCTAGTAAGGAAGGATGTGGCTTTGTTTCTTTCTGGACTTTATCTTTGCTTGCTATATGGATTGTATGTTCCTGATTGGGAGTATCAAATTCCAACGGAACCTTCTTCAGCACCAATGACATTTTCGGTAAAATGTGGCATAAGAGGTGATACTAGACCGGCATGTAACGCTGTTGGGATGATTGATCGTACGATATTAGGCATAAAACATTTGTACAGGAGACCAATATATGCGCGTATGCAGGAGTGTAGTATTAACTCCCCTGACTATGGCCCATTACCTCCTGATGCTCCTTCTTGGTGTCAAGCCGCTTTTGATCCGGAAGGACTCTTAAGTACAGTGATGGCTATTGTTACTTGCTTGGTTGGCTTGCACTATGGACATATTATTGTACACTTTAAGGACCACAAAGTTAGAATGCTATACTGGATGATCCCATCTTCTTGTCTTGTAGTTTGTGGCCTTACTTTGGACATGTTTGGAATGCATATAAATAAGGTTCTCTACTCCTTGAGTTACACATGTGTCACTGCTGCTGCTGCAGGCTTTCTCTTTGTTGGAACATACTTGTTGGTTGATGTATGTGGATATAGTAGCTTGACTAGGATTTTGCAATGGATGGGCAAGCATGCATTAATGATTTATATCCTTGTGGCTTGCAATGTTTTCCCTGTTCTCATCCAAGGATTTTATTGGGGAAAGCCTCAAAATAACATAGATGAGTAA 1311 0.405 MESYEAIKNIDEDEDVEMGHQHKQQIYESRSVINNVESPTSFTSISTKQQPQTQQRLLSLDVFRGFTVLLMILVDEAGGLVPALNHSPWNGLTLADFVMPFFLFIVGVSLALAYKKLSSRVVASRNAFLRALKLLALGLFLQGGYFHRLGDLTFGVDLKQLRWMGILQRIAIAYLLTALCEIWLKADETVNSGSSLVRKDVALFLSGLYLCLLYGLYVPDWEYQIPTEPSSAPMTFSVKCGIRGDTRPACNAVGMIDRTILGIKHLYRRPIYARMQECSINSPDYGPLPPDAPSWCQAAFDPEGLLSTVMAIVTCLVGLHYGHIIVHFKDHKVRMLYWMIPSSCLVVCGLTLDMFGMHINKVLYSLSYTCVTAAAAGFLFVGTYLLVDVCGYSSLTRILQWMGKHALMIYILVACNVFPVLIQGFYWGKPQNNIDE 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g1398 436 Pfam Heparan-alpha-glucosaminide N-acetyltransferase, catalytic 56 180 IPR012429 -
Lal22g1398 436 PANTHER LD22376P 42 434 - -
Lal22g1398 436 PANTHER HEPARAN-ALPHA-GLUCOSAMINIDE N-ACETYLTRANSFERASE-LIKE 42 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g1398 Lal-Chr22 16818728 16826401 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g1398 K10532 - gmx:100811013 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0652 18 5611837 5618089 Lal22g1398 22 16818728 16826401 LSH
Lal22g1398 22 16818728 16826401 Lal6g1744 6 20114215 20121208 LSH