Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0652 ATGATGAAGAGTTACGACGCTATCAAAAACATTGATGATGATGAAGATGAAGATGTTGAGATGGGAAAAGAACAGATCTGTGTAGAATCAAAAACTCTCTTCAACAACAACATTCACTTATCTTCTTCTTCTTCATCATCATCAATACAAAATCACCGTCTTCTTTCACTTGATGTATTCCGTGGTCTCACCGTTGGGCTGATGATACTGGTGGATGAAGCTGGTGGACTCCTTCCTGCATTAAAGCATTCCCCATGGAATGGTTTAACACTAGCTGATTTTGTCATGCCATTTTTCCTTTTTATTGTTGGTGTTTCACTTGCACTGGCATATAAGAAGCTGCCTTCCAGAGTTGTTGCATCTAGTAAAGCAATTTTACGGGCTCTTAAGCTTCTCGCATTAGGCCTTTTTCTTCAAGGAGGTTATTTCCATCGCCTAGGTGATCTGACATTTGGTGTGGATCTTAAGCAGTTAAGATGGATGGGAATACTGCAGAGGATCGCAGTAGCATATTTGATTACGGCTTTGTGTGAAATTTGGCTCAAGGCAGATGACACTGTTAAGTCAGGATCATCCCTAGTAAGGAAGTACCGATACCAGTGGTCTGTGGCTTTGGTTCTTTCTGGACTTTATCTTTGCTTGCTATATGGATTATACGTTCCTGATTGGGAGTATCAAGTTCCAACAGAACCTTCTTCGGCACCAATGACATTTTCAGTGAAATGCAGAGTAAGGGGCGATGTTGGACCAGCTTGTAATGCTGTTGGAATGATTGATCGTACGATATTAGGCATACAACATCTGTACAGGAGACCAGTATATGCGCGAATGCCAGAGTGTAGTATTAATTCCCCTGACAATGGACCATTGCCTCCTAATGCTCCTGCCTGGTGTCAAGCCGCTTTTGATCCTGAAGGACTTTTAAGTTCAGTGATGGCTATTGTTACCTGCTTGGTTGGCTTGCACTATGGACATATTATTGTCCACTTTAAGGACCACAGAGTTAGAATGCTATACTGGATAATCCCAGCATCTTGTCTTGTAGTTTGTGGTCTTACTTTGGCCTTCTTTGGAATGCATATGAATAAGGTTCTCTACTCCTTCAGTTACATGTGTGTCACTTCTGGTGCTGCAGGCATCCTCTTTGTTGGGACATACTTTATGGTTGATGTATGTGGATATAGTCGCTTGACTATGATTTTGCAATGGATGGGCAAGCATGCATTGATGATTTATATACTTGTGGGTTGCAATGTTTTTCCTGTTCTCATCCAAGGATTTTATTGGGGAAAGCCTCAAAATAACATTCTCAAGTTAATTGGAGTTGGTGGTTGA 1335 0.4135 MMKSYDAIKNIDDDEDEDVEMGKEQICVESKTLFNNNIHLSSSSSSSSIQNHRLLSLDVFRGLTVGLMILVDEAGGLLPALKHSPWNGLTLADFVMPFFLFIVGVSLALAYKKLPSRVVASSKAILRALKLLALGLFLQGGYFHRLGDLTFGVDLKQLRWMGILQRIAVAYLITALCEIWLKADDTVKSGSSLVRKYRYQWSVALVLSGLYLCLLYGLYVPDWEYQVPTEPSSAPMTFSVKCRVRGDVGPACNAVGMIDRTILGIQHLYRRPVYARMPECSINSPDNGPLPPNAPAWCQAAFDPEGLLSSVMAIVTCLVGLHYGHIIVHFKDHRVRMLYWIIPASCLVVCGLTLAFFGMHMNKVLYSFSYMCVTSGAAGILFVGTYFMVDVCGYSRLTMILQWMGKHALMIYILVGCNVFPVLIQGFYWGKPQNNILKLIGVGG 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0652 444 PANTHER HEPARAN-ALPHA-GLUCOSAMINIDE N-ACETYLTRANSFERASE-LIKE 37 443 - -
Lal18g0652 444 Pfam Heparan-alpha-glucosaminide N-acetyltransferase, catalytic 53 177 IPR012429 -
Lal18g0652 444 PANTHER LD22376P 37 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0652 Lal-Chr18 5611837 5618089 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0652 K10532 - gmx:100811013 664.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0652 18 5611837 5618089 Lal18g0652 18 5611837 5618089 ECH
Lal18g0652 18 5611837 5618089 Lal22g1398 22 16818728 16826401 LSH
Lal18g0652 18 5611837 5618089 Lal6g1744 6 20114215 20121208 LSH