Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g1290 ATGGACACTCAAAGTGGTGAATATGTTAATTTTGATCTTAAAATTGAAGATTTTTCATCTGATGTAGAAGCAATTGAGGATGTGAGTATTGGTGTGGCATGTTTTTCTGAGAAAGTTTCAAACTTGAGCATTTTTGTGATGCATTTGGAAACTTTAGAGGGTAAATTAGAGGACTTGGTTTTTAATAATGATGAAAATGACATAGATTCTGTTGAAAAGGTAATGGAGTTTGATCTGTTATGTGGGGTGTTGGAATCTGAGATTAGAGAATTGGATTTGTTTTTGGAAACACTTTTTGCTGAGATTGATGATGCTGGAGAGAGAGTGTTGTTGTTTTCTTCCACAATTTGGATGGAAAAGTTGCATGATAATGAACAATGTTTGAAGCAATCTGAGGAACAGTTTTCTGAGATTAAGAAGCAATGTTGTAGTTATGAGAGGACTTTGTCTTCTTATAAGAGGGAAGAAAATGTTAATGTTGAAGAGGGTGAGATTGTCATAGAGGATACTCAATTTTTGAATGTAAGCACAGCGATAAAAATGCAAACAATTGAGGAACAAAGAGATATTCTGAGGATGCTAGAGAAGTCTTTAGCAAGTGAAATGGATCTTGAGAAGAATTTCAATGACTCAAAACAAATTGAAGAAAAGCTAAAACAAACGGTGGTTTCTTTAGAAGAAGAGCTAAATGTCATGGAGGAAGAAGCCAATGACGTGTGGGAAAGATGGTTTGAGGCAGACAATGCATCGGATATTCTGATGGGTATTTCAAAAGACCTGTTAGGTAGACTCCAGATTTCTCAGTTCAATTTGAACGGTTTAAGTCAGCGTGAATCTGAGCTCAGTGCTAAGCTTGATAATATGAGTTCACTTGAGAAGCAGCTAAAAGAATCTGAATGTCAACTACTTCATGTGAAGGCCTCGGCTGATGAATATCAGATACTGTATAATGTGAAGTGTTCTGAAATAAGAGCCATGGAAAACCTTATTGTTGAACTGAAAGAAAATGCATCTAAAGCGGAAATTCAGGCTAACGCAGCTGAAGCTGAGTGTAAACTATTGAAAGAAACTAACACTGAACTCAGCAATGAGATGATTCTTTTGAAAGATGATGGCGGCACGTCTGATACCGTGGAGTCGCTTGAGAGGCAACTAAAGGAATCTGATTTAAAGCTGCAGCATGCGGTAGCATCTGCTGAAGCTTGTCATGAGAAACAAAGCAGGTTGTATTCAACAATCAAAGATATGAAACATGCAATAAAGGATCTTAAGTCAAAGGTTTCTAAATCTGAGCGTTGGGCTGATAGTGCAGAGGAGAAATGTATCGTATTATCTGATTATAATGCTGAGCTAAATGAGGAGGTAAACTTATTGAGGAATAGATTGGAATGTCTGGAAGAATCTGTGCGCCAAGTGGAGGAAGCAAAAGTGGCAACTGCAAAGGATATTAGCAAGCAGACCGTAGTTTTCAAACAGTTGCTAACACAGCTGGCTGTTGAGAGAGAGCGTCTATATAAGCAGCTGTCTTCCTTAGCAAGCGAGAATAAAATTTTGGTGGTGAAGCTGAAGCAGACATGTAAGGATCCTTCTCAAGAAGTTTGTCCAACATCAGCCACTGGCCAGGTGGACAAGACATGGGAAAATTTATCAGAAAATGATAATGTAGTAGAGTCTGTAGATTCTATGCCAGATGTTGGGACTGTAAGGAGAATAGATGCTGGAGTTCTTAGTTTTAAGTATTTACTCATATCAGTGTTTGTGTTACTGATTTCAGCTGTGACTTTTCTGTATTTGAATGATGCCAATGTTGATTTCAGCATATGA 1824 0.3772 MDTQSGEYVNFDLKIEDFSSDVEAIEDVSIGVACFSEKVSNLSIFVMHLETLEGKLEDLVFNNDENDIDSVEKVMEFDLLCGVLESEIRELDLFLETLFAEIDDAGERVLLFSSTIWMEKLHDNEQCLKQSEEQFSEIKKQCCSYERTLSSYKREENVNVEEGEIVIEDTQFLNVSTAIKMQTIEEQRDILRMLEKSLASEMDLEKNFNDSKQIEEKLKQTVVSLEEELNVMEEEANDVWERWFEADNASDILMGISKDLLGRLQISQFNLNGLSQRESELSAKLDNMSSLEKQLKESECQLLHVKASADEYQILYNVKCSEIRAMENLIVELKENASKAEIQANAAEAECKLLKETNTELSNEMILLKDDGGTSDTVESLERQLKESDLKLQHAVASAEACHEKQSRLYSTIKDMKHAIKDLKSKVSKSERWADSAEEKCIVLSDYNAELNEEVNLLRNRLECLEESVRQVEEAKVATAKDISKQTVVFKQLLTQLAVERERLYKQLSSLASENKILVVKLKQTCKDPSQEVCPTSATGQVDKTWENLSENDNVVESVDSMPDVGTVRRIDAGVLSFKYLLISVFVLLISAVTFLYLNDANVDFSI 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g1290 607 PANTHER WPP DOMAIN-INTERACTING TAIL-ANCHORED PROTEIN 1 12 288 IPR040060 -
Lal22g1290 607 PANTHER WPP DOMAIN-INTERACTING TAIL-ANCHORED PROTEIN 1 288 601 IPR040060 -
Lal22g1290 607 PANTHER WPP DOMAIN-INTERACTING TAIL-ANCHORED PROTEIN 1 12 288 IPR039976 -
Lal22g1290 607 PANTHER WPP DOMAIN-INTERACTING TAIL-ANCHORED PROTEIN 1 288 601 IPR039976 -
Lal22g1290 607 Coils Coil 323 364 - -
Lal22g1290 607 Coils Coil 378 398 - -
Lal22g1290 607 Coils Coil 215 235 - -
Lal22g1290 607 Coils Coil 281 308 - -
Lal22g1290 607 Coils Coil 448 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g1290 Lal-Chr22 15655912 15659956 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g1290 - - gmx:100780055 718.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g1290 22 15655912 15659956 Lal22g1290 22 15655912 15659956 ECH
Lal18g0556 18 4695381 4699053 Lal22g1290 22 15655912 15659956 LSH
Lal22g1290 22 15655912 15659956 Lal6g0750 6 4986046 4991201 LSH
Lal24g1320 24 14540701 14545357 Lal22g1290 22 15655912 15659956 PCT
Lal22g1290 22 15655912 15659956 Lal24g1320 24 14540701 14545357 PCT