Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0556 ATGGACACTCAAAGTGGTGAACATGTTAATGTTGATGTTAACCTTGAAGGTGTTTCATCTGATGCTGATGTAATTAGGAATGTGGGTATTGGTGTAGCATGTTTTTCTGAGAAAGTTTCAAACTTTAGCATTTTTGTGATGCATATGGAAACTTTGGAGGGTGAATTAGAGACCTCAGATTCTGTTGAAAAGGTTCTGGTGTTTGATCTTTTATGTGGGGTGTTGGATTCTGAGCTCAGAGAATTGGATTTGTTTTTGGGAACACTTCTTGCTGAGATTGCTGAAGCTGGAGAGAGAGTATCATTGTCCTCTTCTAGCATATGGCATGAAAAGTTGCATGAAAGTGAACACTGTTTGAAGCAATCTGAGGAACAGTTTTCTGAGATTAAGAAGCAATCTTCTACTTTTGAGAGGACTTTGTCTTCTTATAAGAGGGAGGGAAATGTTAATGTTGAAGAGGGTGAGATTCTCATAGAGGATGATCAATCTTTGAATGTAAGCGCATTGATAAAATTGCAAACAATTGAGGAACAAAAAGATATTCTGAGGATGCTAGAGAAATCTTTAGCGAGTGAAATGGACCTTGAGAAGAATTTCAATGATTCAAAACAAATTGAAGAAAAGCTAAAACAAAGGGTGGTTTCTCTAGAACAAGAGCTAAATGTCATGGAGGAAGAAGCAAATGATGCTTGGGAAAGATGGTTTGAGGCAGACAATGCATCTGATATTCTGATGGGTATTTCGAAAGAGCTGTTAGGTAGACTCCAGATTTCTGAGTTCAATTTGAACGGTTTACGTCAGCATGAATCTGAGCTTAGAGCTAAGCTTGAGAACATGTGTTCGCTTGAGAAGCAGCTAAAACAATCTGAATGTCAGCTACTGAATGTGAAGGCCTCAGCAGATGAATATCAGATGCTTTATAATGTTAAGTGTTCTGAAATAAGAGTAATGGAAAACCTTATTGTTGAACTGAAAGAAAATGCATCTAATGCAGAAAGTCGAGCTAACACTGCAGAAGCTGATTGTAAACTATTGAAAGAGACAGACACTGAACTCAACAGTGAGCTCAAACTATTGAAGGAGACCGTAGAATCGCTTGAGAGGCAGCTAAAGGAATCTAATTTGCGGTTGCAGCATGCTGTAGCATCTGCTCAAGCTAGCCAGGAGAAGCAAAGCATGTTCTATTGCACGATTAAAGATATGGAACATGTAATAAAGGATCTTAAGTCAAAGGTGTTAAAAGCCGAGAGTCGGGCTGACAGCGCAGAGAAGAAGCGTATCATATTATCTGAATCTAATGCTGAGTTAAATGAGGAGGCAAGCTTCTTGAGGAGTAGATTGGAATGCTTGGAGGGATCACTGCACCAAGTAGAGGAAGCAAAAGTGGCAACTGCAAAGGATGTTAGCAAGCGGACCATAGTTTTCAAACAGTTACTAACACAGCTGGCTGTTGAGAGAGAGCGACTATATAAGCAGCTGTCTCACTTAGCAAGTGAGAACAAAATTTTGGTGGTGAAATTGAAGCAGGCATGTAAGGATACTTCTGAAGAAGTTAGTCCAACTTCAGCCACTAGCCATGAGGTGGACAAGACTTGGAAAAATGTATCTGCAAATGATAATGATGTAGAGTCTGTAGATTCTATACCAGTTGTTGGAACTGTGAGGAGAATAGATGCTGGAGTTCTTAGTTTCAAGTATTTACTCATATCAGTGTTTGTCTTACTTATTTCTGCTGTGGCTTTTCTGTATTTGAATGATGTGAACGTTGATTTTGGTCTATAA 1782 0.3906 MDTQSGEHVNVDVNLEGVSSDADVIRNVGIGVACFSEKVSNFSIFVMHMETLEGELETSDSVEKVLVFDLLCGVLDSELRELDLFLGTLLAEIAEAGERVSLSSSSIWHEKLHESEHCLKQSEEQFSEIKKQSSTFERTLSSYKREGNVNVEEGEILIEDDQSLNVSALIKLQTIEEQKDILRMLEKSLASEMDLEKNFNDSKQIEEKLKQRVVSLEQELNVMEEEANDAWERWFEADNASDILMGISKELLGRLQISEFNLNGLRQHESELRAKLENMCSLEKQLKQSECQLLNVKASADEYQMLYNVKCSEIRVMENLIVELKENASNAESRANTAEADCKLLKETDTELNSELKLLKETVESLERQLKESNLRLQHAVASAQASQEKQSMFYCTIKDMEHVIKDLKSKVLKAESRADSAEKKRIILSESNAELNEEASFLRSRLECLEGSLHQVEEAKVATAKDVSKRTIVFKQLLTQLAVERERLYKQLSHLASENKILVVKLKQACKDTSEEVSPTSATSHEVDKTWKNVSANDNDVESVDSIPVVGTVRRIDAGVLSFKYLLISVFVLLISAVAFLYLNDVNVDFGL 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0556 593 Coils Coil 314 383 - -
Lal18g0556 593 PANTHER WPP DOMAIN-INTERACTING TAIL-ANCHORED PROTEIN 1 17 279 IPR039976 -
Lal18g0556 593 PANTHER WPP DOMAIN-INTERACTING TAIL-ANCHORED PROTEIN 1 279 585 IPR039976 -
Lal18g0556 593 Coils Coil 398 453 - -
Lal18g0556 593 PANTHER WPP DOMAIN-INTERACTING TAIL-ANCHORED PROTEIN 1 279 585 IPR040060 -
Lal18g0556 593 PANTHER WPP DOMAIN-INTERACTING TAIL-ANCHORED PROTEIN 1 17 279 IPR040060 -
Lal18g0556 593 Coils Coil 199 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0556 Lal-Chr18 4695381 4699053 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0556 - - lang:109325623 783.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0556 18 4695381 4699053 Lal18g0556 18 4695381 4699053 ECH
Lal18g0556 18 4695381 4699053 Lal22g1290 22 15655912 15659956 LSH
Lal18g0556 18 4695381 4699053 Lal6g0750 6 4986046 4991201 LSH
Lal24g1320 24 14540701 14545357 Lal18g0556 18 4695381 4699053 PCT
Lal18g0556 18 4695381 4699053 Lal24g1320 24 14540701 14545357 PCT