Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0807 ATGGCTTTGATCAACACAAGAAATAATAAACCAACTATGTTAAGTTCAAAAACCCTAGCAGATGCAGCTTCATGGTACTGTGTTTTTGTTCTTGTGGCTCTTGTCCTACTAACAATATTTAGAGACAACTTTAATGATCAGATTGTAAATCATGCTAACTTCAGAGCCATTCAACTATCGTCTCGGCCATGTGATGAAATCTATGTGGTTGGAGAAGGTGAGACACTTAACACAATCAGTGACAAGTGTAGTGACCCTTTTATTGTTGAGAACAATCCTCATATTCATGACCCTGATGATGTTTTCCCTGGTCTTGTTATCATGATTACACCTTCACTTCATAGCTAG 348 0.3764 MALINTRNNKPTMLSSKTLADAASWYCVFVLVALVLLTIFRDNFNDQIVNHANFRAIQLSSRPCDEIYVVGEGETLNTISDKCSDPFIVENNPHIHDPDDVFPGLVIMITPSLHS 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0807 115 PANTHER PEPTIDOGLYCAN-BINDING LYSM DOMAIN PROTEIN 5 114 - -
Lal22g0807 115 CDD LysM 67 109 IPR018392 -
Lal22g0807 115 Gene3D LysM domain 58 115 IPR036779 -
Lal22g0807 115 PANTHER EMBRYO SAC 1 5 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0807 Lal-Chr22 5977500 5977847 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0807 - - minc:123217405 150.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0807 22 5977500 5977847 Lal22g0807 22 5977500 5977847 ECH
Lal22g0807 22 5977500 5977847 Lal18g0808 18 10346225 10346569 LSH