Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0808 ATGCCTTTGATCAACCCAGGAACCAAACAACTTATGTTAAGTTCAAAAGCCATAGCGGATACAGTTTCATGGTACTGTGCTTTTGTTCTTGTGGCCCTTATGCTACTAACCATGTTTAGGGACAGCTCTAATGATCAGCTTCAAAATCATGCTAACTTCAGAGACAGACAACTATTGTCACGGCCATGCGATGAAATCTATGTTGTTGGAGAAGGTGAGACACTTCATACAATCAGTGATAAGTGTGGTGACCCTTTTATTGTTGAGAATAATCCTCATATTCATGACCCTGATGATGTCTTCCCTGGCCTCGTTATCAAGATTACACCTTCACTTCATAGCTAG 345 0.4087 MPLINPGTKQLMLSSKAIADTVSWYCAFVLVALMLLTMFRDSSNDQLQNHANFRDRQLLSRPCDEIYVVGEGETLHTISDKCGDPFIVENNPHIHDPDDVFPGLVIKITPSLHS 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0808 114 Pfam LysM domain 67 108 IPR018392 -
Lal18g0808 114 Gene3D LysM domain 57 114 IPR036779 -
Lal18g0808 114 CDD LysM 66 108 IPR018392 -
Lal18g0808 114 PANTHER PEPTIDOGLYCAN-BINDING LYSM DOMAIN PROTEIN 9 113 - -
Lal18g0808 114 PANTHER EMBRYO SAC 1 9 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0808 Lal-Chr18 10346225 10346569 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0808 - - gmx:100815990 161.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0808 18 10346225 10346569 Lal18g0808 18 10346225 10346569 ECH
Lal22g0807 22 5977500 5977847 Lal18g0808 18 10346225 10346569 LSH