Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0803 ATGGCGGAAAACGACATCACCGTCCCCCTCCTCTCCTCCTCCGACCACCTCATCATCACCGTTGAATCCACCTCCTCCACTAACCAATCCCCTACACCCAACCCCTTCGCCTTCATCGGATGCGGCCCCGTACCGGAGCCGCCGGAGCCGTCGACGGTGGACCCGTTCCGGAACAACACGCCGAGGATGGACGGGGTGTATGAGTGGTTGAAGATTGTGGCGTGTTTGCCACTCGCGGTGGTGCGAGTGGTTCTGTTTGGGTTGTGTTTAGCGGTTGGGTTTGTTGCAACGAAAATTGCTTTGAAAGGATGGAATGATAATAAGAACCCTATGCCTAAGTGGAGGTCTAGGGTCATGTGGGTTACTAGAACGTGTGCTAGAGTTATTCTCTTCTCTTTTGGCTATCAGTGGATAAAACGGAGGGGAAGGCCTGCACCGCGGGAAATTGCTCCCATAATTGTATCTAATCATGTATCTTATATTGAGCCTATCTTCTATTTCTATGAGTTATTTGCCACCATTGTGGCATCTGAGTCTCATGACTCCTTACCTTTTGTTGGCACCATTGTTAGGGCAATGCAGGTCATATATGTAGACAGGTTCTCAGCATCATCAAGGAAGCAAGTTGTCCAGGAAATAAAGAGAAGGGCTTCTTGCGATAGATTTCCTCGAGTTCTATTATTTCCTGAAGGAACCACAACCAATGGCAGGAACCTTATCTCCTTTCAACTTGGTGCATTTATTGCTGGGTACCCAATCCAGCCTGTAGTCATTCGCTATCCTCATGTGCACTTTGATCAATCTTGGGGTAATATTTCTTTGACAATGCTTATGTTAAGGATGTTCACTCAGTTCCACAACTTCTTTGAGGTAGAATATCTTCCTGTCATTTCACCCCTGGATGATAAGGAAACTGCCGAACATTTTCGTGAGAGGACTGCCCGTGCTATTGCAACTGCAATGAATGGTGTCCAAACCGGACATTCCTATGGAGACCTAATGCTTTATACCAAAGCACAAGAGTCTAAAAAGGAGAACCCCTCAAGTTATATGGTTGAGATGGCAAGCGTGGAATCGTTATTTCGTATCAGAAGCTTGGAAGCTGTGGGCTTTCTGGATAAATTCTTGGCTATGAATCCTGATCCCAGTGGCCGTGTTCAATATGATGGCTTCTTGAGAGTTTTAAGACTTAAGGATTGCCCTCTATCTGAAAAGGTATTTGCATTTATTGATGTAAAGAAAAGTGGGACAATTACATTCAGACAGTTTTTGTACGGTTCTGCGCATGTCATGACGCAATCGGGGTTCAATCAAGCATGTGAAGTAGCCTTTGCTGAGTGTGGTGGTGCAGTAAAGGCCTACATTGTAGAACAACAGTTACAATATTTCATCCAACATGCTATCCCTAGTTGGAAGGAAAATGAGGTCCACGAGCTTTTCGAGTTATTTGATATCGATAACGATGGAAGAATCAACAAAGATGAATTTATTTCATGCCTAAGAAGAAATCCTCTTCTGATAGCATTTTTTACACCACACCAGCAGCACAAGGAGTGTGGGTCAAATGGAGTAATAGAGATATTGTGA 1587 0.448 MAENDITVPLLSSSDHLIITVESTSSTNQSPTPNPFAFIGCGPVPEPPEPSTVDPFRNNTPRMDGVYEWLKIVACLPLAVVRVVLFGLCLAVGFVATKIALKGWNDNKNPMPKWRSRVMWVTRTCARVILFSFGYQWIKRRGRPAPREIAPIIVSNHVSYIEPIFYFYELFATIVASESHDSLPFVGTIVRAMQVIYVDRFSASSRKQVVQEIKRRASCDRFPRVLLFPEGTTTNGRNLISFQLGAFIAGYPIQPVVIRYPHVHFDQSWGNISLTMLMLRMFTQFHNFFEVEYLPVISPLDDKETAEHFRERTARAIATAMNGVQTGHSYGDLMLYTKAQESKKENPSSYMVEMASVESLFRIRSLEAVGFLDKFLAMNPDPSGRVQYDGFLRVLRLKDCPLSEKVFAFIDVKKSGTITFRQFLYGSAHVMTQSGFNQACEVAFAECGGAVKAYIVEQQLQYFIQHAIPSWKENEVHELFELFDIDNDGRINKDEFISCLRRNPLLIAFFTPHQQHKECGSNGVIEIL 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0803 528 SMART plsc_2 151 261 IPR002123 GO:0016746
Lal22g0803 528 ProSitePatterns EF-hand calcium-binding domain. 484 496 IPR018247 -
Lal22g0803 528 Pfam Acyltransferase 149 258 IPR002123 GO:0016746
Lal22g0803 528 Pfam EF hand 475 502 IPR002048 GO:0005509
Lal22g0803 528 SMART efh_1 475 503 IPR002048 GO:0005509
Lal22g0803 528 SMART efh_1 402 430 IPR002048 GO:0005509
Lal22g0803 528 CDD EFh 454 497 IPR002048 GO:0005509
Lal22g0803 528 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 131 322 - -
Lal22g0803 528 Gene3D - 342 517 - -
Lal22g0803 528 PANTHER LYSOPHOSPHATIDYLCHOLINE ACYLTRANSFERASE 1-RELATED 32 515 - -
Lal22g0803 528 ProSiteProfiles EF-hand calcium-binding domain profile. 471 506 IPR002048 GO:0005509
Lal22g0803 528 SUPERFAMILY EF-hand 370 513 IPR011992 -
Lal22g0803 528 CDD LPLAT_LPCAT1-like 126 334 IPR045252 GO:0008374
Lal22g0803 528 PANTHER PHOSPHOLIPID ACYLTRANSFERASE 32 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0803 Lal-Chr22 5945568 5953649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0803 111 336 Acyl Lipid Metabolism Gene Families AT1G80950 31.128 4.16e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0803 K13510 - gmx:100818109 827.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0803 22 5945568 5953649 Lal22g0803 22 5945568 5953649 ECH
Lal22g0803 22 5945568 5953649 Lal18g0809 18 10366439 10375239 LSH