Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0809 ATGGCGGACCATGACGTCACCACCCCACTTCTCAACTCCTCCGATCATTTCATCATAACCGTTGACTCCACCTCCTCCACCAATAACCATTCACCAAAACCCAACCCTTTTGCCTTCATCGGATGCTCCTCCGTGCCCATATCGCCGGAGCCGATGACGGTGGACCCGTTCCGGAACAACACGCCGAGGGTGGAAGGGGTGTATGAGTGGGTGAAGGTGGTGGTGTCTCTGCCACTTGTGGTGGTGCGGTTGGTGCTGTTTGTGCTGTGTTTAGCGGTTGGTTTTGTGGCAACGAAAATTGCGTTGGGTGGTTGGAAAGATAAGAGGAACCCTATGCCTAAGTGGAGGGCTTGGGTTATGTGGGTTACTAGAATGTGTGCTAGAGTTATACTCTTTGCTTTTGGCTATCACTGGATAAAACGGAGGGGAAGACCTGCACCGAGGGAAATTGCTCCCATAATTGTATCTAATCATGTATCTTATATTGAGCCAATCTTCTATTTCTATGAATTATTTGCCACCATTGTGGCGTCCGAGTCTCATGACTCCTTACCTTTTGTTGGCACCATTGTTAGAGCAATGCAGGTCATATATGTAGACAGGTCCTCTCCATCATCAAGGAAGCAAGTTGTCCAGGAAATAAAGTTATGTTTTGTTCAGAAGTTTCACAACATCATTTTTCATATGTTCCTCCAATACCCCATTGTTTGCACCAAACTTTGGCAAGGAACAACAACCAATGGCAGGAACCTTATCTCCTTCCAACTTGGTGCATTTATCGCTGGGTACCCAATCCAGCCTGTAATTGTTCGCTATCCTCATGTGCACTTTGATCAATCTTGGGGTAGTGTTTCTTTGGCAATGCTTATGATCAGGATGTTCACTCAGTTTCACAACTTCTTTGAGGTAGAATATCTTCCTGTGATTTATCCCCTGGATGATAAGGAAACTGCTGTTCATTTTCGTGAGAGGACTGCCCGTGCTATTGCAACTGCAATAAATGGTGTCCAAACAGGACATTCCTATGGAGATGTGATGCTTTATATGAAAGCACAAGAAGCAAAAAAGGAGAACCCCTCAAGTTATATGGTTGAAATGGCAACCGTGGAATCGTTATTTCATATCAGAAGCTTGGAAGTTGTGGAATTTGTGGACAAATTCTTGGCTATGAATCCTGATCCCAGTGGTCGCGTTCAATATGACGACTTCTTGAAGGTTTTAAGACTTCAGGATTGCCCTCTATCTGAAAAGGTATTTGCATTTATTGATATGGAGAACAGGGGGACTATTACATTTAGACAGTTCTTGTATGCATCTGCACATGTCATGACGCAACCAGAGTTCCATCAAGCTTGTGAAGTAGCCTTTGCTGGGCATGGTGGTGCAGTAAAGGCCTACATTGATGAACAAGAGTTCCAAGATTTCATCCGACATGCTATCCCCAGCTGGAAGGAGGATGGGGTCCATGAGCTTTTCGAGTTATTTGATAATGATAATGATGGAAGAATCAACAAGGATGATTTTCTTTCATGCCTCAGAAGAAATCCTCTTCTCATAGCACTTTTTTCATCTCACCTGCAGCACAAGGAGTGTGGTTGTAATGGAGTAATAGAGATAGTGTGA 1623 0.4424 MADHDVTTPLLNSSDHFIITVDSTSSTNNHSPKPNPFAFIGCSSVPISPEPMTVDPFRNNTPRVEGVYEWVKVVVSLPLVVVRLVLFVLCLAVGFVATKIALGGWKDKRNPMPKWRAWVMWVTRMCARVILFAFGYHWIKRRGRPAPREIAPIIVSNHVSYIEPIFYFYELFATIVASESHDSLPFVGTIVRAMQVIYVDRSSPSSRKQVVQEIKLCFVQKFHNIIFHMFLQYPIVCTKLWQGTTTNGRNLISFQLGAFIAGYPIQPVIVRYPHVHFDQSWGSVSLAMLMIRMFTQFHNFFEVEYLPVIYPLDDKETAVHFRERTARAIATAINGVQTGHSYGDVMLYMKAQEAKKENPSSYMVEMATVESLFHIRSLEVVEFVDKFLAMNPDPSGRVQYDDFLKVLRLQDCPLSEKVFAFIDMENRGTITFRQFLYASAHVMTQPEFHQACEVAFAGHGGAVKAYIDEQEFQDFIRHAIPSWKEDGVHELFELFDNDNDGRINKDDFLSCLRRNPLLIALFSSHLQHKECGCNGVIEIV 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0809 540 CDD LPLAT_LPCAT1-like 127 346 IPR045252 GO:0008374
Lal18g0809 540 PANTHER PHOSPHOLIPID ACYLTRANSFERASE 32 528 - -
Lal18g0809 540 Gene3D - 365 518 - -
Lal18g0809 540 CDD EFh 466 509 IPR002048 GO:0005509
Lal18g0809 540 ProSiteProfiles EF-hand calcium-binding domain profile. 483 518 IPR002048 GO:0005509
Lal18g0809 540 Pfam Acyltransferase 150 268 IPR002123 GO:0016746
Lal18g0809 540 PANTHER LYSOPHOSPHATIDYLCHOLINE ACYLTRANSFERASE 1-RELATED 32 528 - -
Lal18g0809 540 SUPERFAMILY EF-hand 373 525 IPR011992 -
Lal18g0809 540 SMART efh_1 414 442 IPR002048 GO:0005509
Lal18g0809 540 SMART efh_1 382 410 IPR002048 GO:0005509
Lal18g0809 540 SMART efh_1 487 515 IPR002048 GO:0005509
Lal18g0809 540 Pfam EF-hand domain pair 464 514 IPR002048 GO:0005509
Lal18g0809 540 ProSitePatterns EF-hand calcium-binding domain. 496 508 IPR018247 -
Lal18g0809 540 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 86 329 - -
Lal18g0809 540 SMART plsc_2 152 273 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0809 Lal-Chr18 10366439 10375239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0809 104 348 Acyl Lipid Metabolism Gene Families AT1G80950 29.520 1.91e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0809 K13510 - gmx:100818109 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0803 22 5945568 5953649 Lal18g0809 18 10366439 10375239 LSH