Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0487 ATGCCCTTCAGTTTTCAAACTAAAGTTAGTTTGTTAAAGGCGATGATGGATAATAATAGATGGTTATGGAAGCATAAGTCTTCTGAGAAGAGCCTTGGTGAAACTGAAAGTTCAGAATCCATGTCATCTCATTCTGAGAGATACTCAGATGATCAGGAGGAACCAAAGGAATCTCCTAATGGAGGCAATCACTCACCTGATTTCACTTCAAAAGCTGCAGCCTCTGAGGAAGATGATAATGATAGTTCAATTATGAATGCACTATTTCTTGAAGAAGTCACCTCAAAATCTATACCTACTACAGGCATCACAAATGATTGCTCTCTAGAGAAAAATGAAAATGGAGAAAATGACAATATAAAAAATGTAAAAGAAGGTGGTCTAAATAATGGATTGAAGAATATGTCAGAGAAGCTATCTGCAGTGCCAGCGCTTGTAAATGCCAATGCCAAAGAAGACTTGGTTCAGCAGCATGCTGAAGTTGCTGAAGAAGCCATTGCAGGCTGGGAAAAGGCTGAAAAAGAAGTGGTAGTATTAAAGAAGCAACTTGATGTATTTACTCTCAGGAATTCAGCTCTAGCAGATCGAGTCTCCCATCTTGAAAGTGCACTTAAGGAGTGTGTTAGGCAGCTAAGACAGACAAGGGATGAGCAGGAAGAAAATATCGATAATGCTGTACTGAAGAAAACTCTTAACTTAGAATCCGACAAAATTGAACTTGAGAACAAGCTTGTTGAGCTCCAGAGCAAATTAGATTCTTCTAATGCCAGATATCTTGGTATGTGTCAAAAGGTTGAATGTCTGGAGAAAGAGAACATGTCTCTGAGGCATGAGCTCGTAGCTCGATCAGAAGAGCTGGAAATCAGAACAATTGAGTGGGATTTAAGCACTCAAGCTGCTGAGACAGCAAGCAAGCAACATTTAGAGAGCATCAAGAGGGTAGCTAAGCTTGAGGCTGAATGCCGGAAATTGAAGAGCATCACTTCTAAAGTTTCCTTTGCTAATGATCATAAATCTATTACTTCTTCCTCTTTTGGTGTTGAATCTCTTACCGATAGTCAATCGGATAGCGGTGAACAGCTAAATAAACTGGAGACCAATACTCACAAGATGAGTTGCTCAGAACTAAACAAGTGTGAGCCAAGTTGTTCTGACTCATGGGCATCTGCACTAATTGCTGAGCTTGATCAGTTCAAGAATGAAAATTGCAGACAACAAACTCCATCCAGTTCTGTTAAAATTGATCTCATGGATGATTTTCTTGAAATGGAACAACTTGTTGCATTGCCCGAGACTAACAATGAAAAGCTTGTCCAAGAGTCAGTTGTTTCCAATCAATGCAGTAATGAAGAAAACTGTCTCAGAGTGGAGTTTGAGATAATGAACCAACAAATAGAAGAACTGAGCAACAAGTTAGAGAAGATAGAGGCAGAAAAGGCTCAATTAGAGATTGCTTTGATGACTAGTGAAGAGTGCATTGAGGAGTCACAACTTCAGTTGAGGGAGGCAGAAAATAAATTGGTGGAGTTGCAAAGAGAGCTAGAAAAAGCATACACATCAAAGCAAATAATAGAAAATCACCTATTGTGCATGGAGGCAGATGCTCAAACATTATCTGCAAAATTTGATTTATTAGAAGCAAAGTTCGATAAGGAGAGGGCTTTGTCCGATGAAATTGCAATGAAGTGTAAAGACTTGGAGGAAGAGCTAGAAAGCAAATCTGCAAAGGTTGACTTGCTAAAAGCAGAAGTTGATAAGGAGAAGGCTTTGTCAGATGAAATTACAATGAAGTGTAAAGACATGGAGGAAAAGCTAGAAATCAAATCTGCAAAGGTTGTCATATTAGAAGGAGAGGTTGATAAGGAGAGGGCTATGTCAGAAGAAATTGCAACAAAGTATAAGGAATTGGAGGAAGAAATGCTCAGGTTGACAGCTAGCTCATATGTAGAAAAGAAGATTAAGCAGGAGGACCTAGAACTAGCTGCTGGAAAGCTTGCTGAGTGCCAGAAAACAATAGCATCTTTGGGGAATCAGTTAAAATCCCTGGCAACAATAGAAGATTTCCTTATTGATACTGCTAGCATTCCTGTGAGGCCTTCACACCTTGAAGAGATGTGGAAGTTGCATTCAAAGGACACATTTTCACCTAAAAGTGATTCCATTTTTTCAAAGATTGCTAATGTGAGCTTAGTTCCATCCTTAAACAAAAATGAAGCAAGTTCAACACCTTCATCAACCTCATCTGCTACCATGCCAAATCGTGACACTTCTGAGAAGAGTAGAAATGGCTTTTCAAAAACGTTCTCTAGAGCCAAGAGTGGAATCAAACTAGAAATTTAG 2340 0.3915 MPFSFQTKVSLLKAMMDNNRWLWKHKSSEKSLGETESSESMSSHSERYSDDQEEPKESPNGGNHSPDFTSKAAASEEDDNDSSIMNALFLEEVTSKSIPTTGITNDCSLEKNENGENDNIKNVKEGGLNNGLKNMSEKLSAVPALVNANAKEDLVQQHAEVAEEAIAGWEKAEKEVVVLKKQLDVFTLRNSALADRVSHLESALKECVRQLRQTRDEQEENIDNAVLKKTLNLESDKIELENKLVELQSKLDSSNARYLGMCQKVECLEKENMSLRHELVARSEELEIRTIEWDLSTQAAETASKQHLESIKRVAKLEAECRKLKSITSKVSFANDHKSITSSSFGVESLTDSQSDSGEQLNKLETNTHKMSCSELNKCEPSCSDSWASALIAELDQFKNENCRQQTPSSSVKIDLMDDFLEMEQLVALPETNNEKLVQESVVSNQCSNEENCLRVEFEIMNQQIEELSNKLEKIEAEKAQLEIALMTSEECIEESQLQLREAENKLVELQRELEKAYTSKQIIENHLLCMEADAQTLSAKFDLLEAKFDKERALSDEIAMKCKDLEEELESKSAKVDLLKAEVDKEKALSDEITMKCKDMEEKLEIKSAKVVILEGEVDKERAMSEEIATKYKELEEEMLRLTASSYVEKKIKQEDLELAAGKLAECQKTIASLGNQLKSLATIEDFLIDTASIPVRPSHLEEMWKLHSKDTFSPKSDSIFSKIANVSLVPSLNKNEASSTPSSTSSATMPNRDTSEKSRNGFSKTFSRAKSGIKLEI 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0487 779 MobiDBLite consensus disorder prediction 100 119 - -
Lal22g0487 779 Coils Coil 197 228 - -
Lal22g0487 779 Coils Coil 230 257 - -
Lal22g0487 779 Coils Coil 598 646 - -
Lal22g0487 779 MobiDBLite consensus disorder prediction 735 769 - -
Lal22g0487 779 Coils Coil 556 590 - -
Lal22g0487 779 Coils Coil 451 527 - -
Lal22g0487 779 Coils Coil 265 285 - -
Lal22g0487 779 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 569 606 - -
Lal22g0487 779 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 519 573 - -
Lal22g0487 779 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 598 778 - -
Lal22g0487 779 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 16 525 - -
Lal22g0487 779 MobiDBLite consensus disorder prediction 27 81 - -
Lal22g0487 779 MobiDBLite consensus disorder prediction 40 60 - -
Lal22g0487 779 Pfam Filament-like plant protein, long coiled-coil 365 445 IPR008587 -
Lal22g0487 779 Pfam Filament-like plant protein, long coiled-coil 151 255 IPR008587 -
Lal22g0487 779 Pfam Filament-like plant protein, long coiled-coil 563 684 IPR008587 -
Lal22g0487 779 Pfam Filament-like plant protein, long coiled-coil 261 330 IPR008587 -
Lal22g0487 779 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 569 606 - -
Lal22g0487 779 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 16 525 - -
Lal22g0487 779 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 519 573 - -
Lal22g0487 779 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 598 778 - -
Lal22g0487 779 MobiDBLite consensus disorder prediction 735 779 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0487 Lal-Chr22 3226073 3231101 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0487 - - mtr:MTR_1g030010 889.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0487 22 3226073 3231101 Lal22g0487 22 3226073 3231101 ECH
Lal18g1123 18 14192570 14197512 Lal22g0487 22 3226073 3231101 LSH
Lal22g0487 22 3226073 3231101 Lal6g0539 6 3458871 3463119 LSH