Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0285 ATGTCCCTACTCTCAGATTTAATCAACCTTAACCTCTCTGATGCCACTGAGAAGGTTATTGCTGAGTACATATGGGTGGGTGGATCTGGTGTGGACCTGAGGAGTAAAGCAAGGACCCTCTCAGGACCTGTTAATGACCCTTCAAAGCTTCCCAAGTGGAACTATGATGGCTCCAGTACTGGCCAGGCTCCTGGAAAAGATAGTGAAGTGATCTTATGGCCACAAGCAATTTTTAAGGATCCATTCAGGAGGGGTAACAATATCCTGGTTATGTGTGATACTTACACTCCTGCTGGAGAACCCATTCCCACAAACAAGAGACATGCTGCAGCAAAGATATTCAGCCATCCTGATGTTGTTGCTGAAGAACCATGGTTTGGTATTGAGCAGGAATACACTTTGTTACAAAAAGATATTCATTGGCCTATTGGATGGCCACTTGGTGGTTTTCCTGGACCTCAGGGACCATACTATTGCGGTACCGGTGCTGAAAAAGCTTTTGGTCGCGATATTGTTAATTCACATTACAAGGCATGTCTTTATGCTGGAATTAATATTAGTGGTATTAATGCAGAAGTGATGCCTGGCCAGTGGGAATTCCAAGTTGGTCCAAGTGTTGGTATCTCTGCTGGTGATGAATTGTGGGTTGCTCGTTACATTTTGGAGAGGATCACTGAGATTGCCGGGGTGGTCCTTTCCTTAGACCCCAAACCAATTCCGGGTGATTGGAATGGTGCTGGTGCTCACACTAATTACAGTACCAAGTCCATGAGAAATGATGGTGGCTATGAAGTCATCAAAAAAGCAATTGAGAAGTTGGGGAAGAGACACAATGAGCACATTGCTGCTTATGGTGAAGGTAACGAACGCCGTTTGACCGGAAGACATGAAACAGCTGATATTAGTACTTTCTTGTGGGGTGTTGCAAACCGTGGAGCTTCTATTAGGGTGGGAAGGGAGACTGAGAAAGATGGGAAGGGATATTTTGAGGACAGAAGGCCTGCTTCAAACATGGACCCATATGTGGTCACTTCCATGATTGCAGAGACAACCCTTCTCTAG 1062 0.4529 MSLLSDLINLNLSDATEKVIAEYIWVGGSGVDLRSKARTLSGPVNDPSKLPKWNYDGSSTGQAPGKDSEVILWPQAIFKDPFRRGNNILVMCDTYTPAGEPIPTNKRHAAAKIFSHPDVVAEEPWFGIEQEYTLLQKDIHWPIGWPLGGFPGPQGPYYCGTGAEKAFGRDIVNSHYKACLYAGINISGINAEVMPGQWEFQVGPSVGISAGDELWVARYILERITEIAGVVLSLDPKPIPGDWNGAGAHTNYSTKSMRNDGGYEVIKKAIEKLGKRHNEHIAAYGEGNERRLTGRHETADISTFLWGVANRGASIRVGRETEKDGKGYFEDRRPASNMDPYVVTSMIAETTLL 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0285 353 SUPERFAMILY Glutamine synthetase/guanido kinase 103 352 IPR014746 GO:0003824
Lal22g0285 353 ProSiteProfiles Glutamine synthetase (GS) beta-grasp domain profile. 19 99 IPR008147 GO:0004356|GO:0006542|GO:0006807
Lal22g0285 353 ProSitePatterns Glutamine synthetase putative ATP-binding region signature. 237 253 IPR027303 -
Lal22g0285 353 PANTHER GLUTAMINE SYNTHETASE 1 353 - -
Lal22g0285 353 SUPERFAMILY Glutamine synthetase, N-terminal domain 14 102 IPR036651 GO:0004356|GO:0006542|GO:0006807
Lal22g0285 353 Pfam Glutamine synthetase, catalytic domain 167 254 IPR008146 GO:0004356|GO:0006807
Lal22g0285 353 SMART Gln_synt_C_2 103 351 IPR008146 GO:0004356|GO:0006807
Lal22g0285 353 Pfam Glutamine synthetase, beta-Grasp domain 21 97 IPR008147 GO:0004356|GO:0006542|GO:0006807
Lal22g0285 353 PANTHER GLUTAMINE SYNTHETASE 1 353 - -
Lal22g0285 353 Gene3D Glutamine synthetase/guanido kinase, catalytic domain 104 353 - -
Lal22g0285 353 ProSiteProfiles Glutamine synthetase (GS) catalytic domain profile. 106 353 IPR008146 GO:0004356|GO:0006807
Lal22g0285 353 Gene3D - 1 103 IPR036651 GO:0004356|GO:0006542|GO:0006807
Lal22g0285 353 ProSitePatterns Glutamine synthetase signature 1. 55 72 IPR027302 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0285 Lal-Chr22 1815742 1819159 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0285 K01915 - tcc:18601193 679.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0522 3 3805197 3809702 Lal22g0285 22 1815742 1819159 PCT
Lal5g1201 5 14810039 14814835 Lal22g0285 22 1815742 1819159 PCT