Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0211 ATGAAGCCACCATTCTCACCTTCTTCCTCTCTTCTTAGAACCAATAAGCCTCGTCTCTATCCTTATCTCTTCACCCTCTTTGCTTTCATTTTCTTTGTTTCTATTCTCTATGGTGAAGACTTCATGTGCATATTTGGCCAACAGTACTTCCAACTCTACTCCAACCCCCAAATACTCTTCTCTTCCCCACCCCAGAATGTGAAGAGACAGAAACTAGCGTATGCAGTGGGGAAAACAGAGGAAGGGTGTGACGTGTTCAGCGGGAAGTGGATTCGAGACAACGTGACTCGACCCATGTACGAGGAATCAGAATGTCCGTACATACAGCCGCAATTGACTTGTCAACAACATGGACGCCCCGATAAGGAGTACCGCCATTGGAGGTGGCAGCCTCACGGTTGCGATCTTCCCAGATTCAATGCCAGCTTGATGCTTGAAACACTTCGTGGGAGGAGGATGATGTTTGTTGGAGACTCCCTCAACCGTGGTCAGTATGTCTCATTTGTATGCCTTCTCCATCACCTCATTCCTGAAGATGCCAAATCCATGGAAACCTTTGATTCACTCACTGTATTCACAGCCAAGGAATACAATGCTACAATTGAGTTCTATTGGGCACCTTTTCTTCTCGAATCGAACTCGGACGATGCTGTGATTCATAGGGTATCTGATAGGATTGTCAGAAAGGGTTCAATCAATAAGCATGGCAGGCATTGGAAAGGTGTTGATATTTTGGTACTCAACACTTATCTTTGGTGGATGACTGGATTGAAAATGAAGATATTACTTGGATCTTTTGATGATGAAGTAAAAGAGATTGTAGAGCTTTCAACAGAGGATGCTTATCGTATGGCTATGAAGAGTATGCTCAGATGGGTAAGGTTGAATATGGACCCAAAAAAGACTAGAGTCTTCTTCACTAGCATGTCACCCACTCATGCAAAGAGTATAGACTGGGGAGGTGAAGCTGGAGGGAGCTGCTACAATGAAACAAGTATGATAGATGATCCAACATATTGGGGCTCTGACTCAAGAAAGAGTATAATGCAAGTAATTGGAGAAGTGTTTAGAAAATCCAAAGTGCCCATTACATTTCTGAACATCACACAGCTATCTAGTTACCGGAAAGATGCACATACTTCAATCTACAAGAAGCAATGGAGTCCATTGACTCCAGAACAGTTAGCCAACCCTGTTAGCTATGCTGATTGTGTACACTGGTGTTTGCCTGGCCTTCAAGATACTTGGAATGAGCTTCTTTTTGCAAAGTTATTTTACCCTTGA 1284 0.4338 MKPPFSPSSSLLRTNKPRLYPYLFTLFAFIFFVSILYGEDFMCIFGQQYFQLYSNPQILFSSPPQNVKRQKLAYAVGKTEEGCDVFSGKWIRDNVTRPMYEESECPYIQPQLTCQQHGRPDKEYRHWRWQPHGCDLPRFNASLMLETLRGRRMMFVGDSLNRGQYVSFVCLLHHLIPEDAKSMETFDSLTVFTAKEYNATIEFYWAPFLLESNSDDAVIHRVSDRIVRKGSINKHGRHWKGVDILVLNTYLWWMTGLKMKILLGSFDDEVKEIVELSTEDAYRMAMKSMLRWVRLNMDPKKTRVFFTSMSPTHAKSIDWGGEAGGSCYNETSMIDDPTYWGSDSRKSIMQVIGEVFRKSKVPITFLNITQLSSYRKDAHTSIYKKQWSPLTPEQLANPVSYADCVHWCLPGLQDTWNELLFAKLFYP 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0211 427 Pfam PMR5 N terminal Domain 82 135 IPR025846 -
Lal22g0211 427 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 10 427 IPR029962 GO:0016413
Lal22g0211 427 PANTHER PMR5 DOMAIN, PC-ESTERASE, PROTEIN TRICHOME BIREFRINGENCE-LIKE 32/46-RELATED 10 427 - -
Lal22g0211 427 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 136 422 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0211 Lal-Chr22 1302065 1305492 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0211 - - gmx:100785571 785.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0211 22 1302065 1305492 Lal22g0211 22 1302065 1305492 ECH
Lal17g1591 17 17315410 17319027 Lal22g0211 22 1302065 1305492 PCT
Lal22g0211 22 1302065 1305492 Lal17g1591 17 17315410 17319027 PCT