Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1591 ATGAACCTGTCTCCACATTCTCTCTTCAGAACCAAGTTTCTCTCTTTTCCCTATCTCTTCACCACCCTTTTGGCTTTTATTCTCTTCACTGTAATCCTTTTTGGTTACCACTTCTTCTTCAACTTTTCTCAACTTACACCATTCTACACACTCCATGACTTGACTCAGTTCCCTAGTCAAGAGAAGAGCAATGTTCATAAGGTTGCATTTGCTGTGGAGGAGACAGAGGAAAGGTGTGATATGTTTAAAGGAAGGTGGGTTAAGGACGTGTTGGCTCGGCCGCTATATGAGGAATTGGAGTGTCCGTACATACAGCCACAGTTAACTTGCGAACAACATGGGAGGCCGGATAAGGATTACCGGAATTGGCGCTGGCAGCCACATGGTTGTGATCTTCCCAAATTCAATGCCAGTTTGATGCTGGAAACGCTTCGTGGGAAGAGGATGATGTTGGTCGGAGACTCACTTAACCGGGGTCAGTATGTCTCTTTGGTATGCCTTCTCCATAAATTAATTCCTGAAGATTCCAAATCAGAGGAAACCTTTGATTCACTCACTGTCTTCACAGCCAAGGAATACAATGCTACAATTGAGTACTATTGGGCACCTTTTCTTCTTGAATCGAACTCCGATAATGCTATCATCCATAGGGTATCTGATAGAATTGTGAGAAAAGGTTCAATCAATAAGCATGGCCATTATTGGAAAGGTGCTGATATTATAGTATTCAATACCTATCTTTGGTGGATAACTGGCTCCAAAATGAAAGTCTTGCTTGGATCTTTTGATGATAAAGAAAAAGTGATTGTTGAGATGCCAACAGAGGATGCTTATCGAATGGCTATAAAAAGTATGGTTAGATGGGTGAGACTGAATATGGACACAAACAAGACTAGAGTATTCTTCACCAGCATGTCACCTTCTCATACAAAGAGCAAAGAGTGGGGTGGTAAAGAAGGAGGTAATTGCTACAATGAAACAACACCAATTGATGATTCTACATATTGGGGTTCAGATTCAGAGAAAAGCATAATGCAAGTAATTGAAGAAGTGTTGAGAAAATCCAAAGTTCCAATTACATTTCTGAATATAACTCAGCTCTCTAGCTATAGAAAAGATGCACATACTTCAATCTACAAGAAGCAATGGAATCCATTGAGTCAAGAACAATTAGCTAACCCTGCTAGCTATGCTGATTGTATACATTGGTGTTTACCTGGACTTCAAGATACTTGGAATCAACTTCTCTTTGCTAAGTTGTTTTATCCATGA 1272 0.4017 MNLSPHSLFRTKFLSFPYLFTTLLAFILFTVILFGYHFFFNFSQLTPFYTLHDLTQFPSQEKSNVHKVAFAVEETEERCDMFKGRWVKDVLARPLYEELECPYIQPQLTCEQHGRPDKDYRNWRWQPHGCDLPKFNASLMLETLRGKRMMLVGDSLNRGQYVSLVCLLHKLIPEDSKSEETFDSLTVFTAKEYNATIEYYWAPFLLESNSDNAIIHRVSDRIVRKGSINKHGHYWKGADIIVFNTYLWWITGSKMKVLLGSFDDKEKVIVEMPTEDAYRMAIKSMVRWVRLNMDTNKTRVFFTSMSPSHTKSKEWGGKEGGNCYNETTPIDDSTYWGSDSEKSIMQVIEEVLRKSKVPITFLNITQLSSYRKDAHTSIYKKQWNPLSQEQLANPASYADCIHWCLPGLQDTWNQLLFAKLFYP 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1591 423 Pfam PMR5 N terminal Domain 78 131 IPR025846 -
Lal17g1591 423 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 132 418 IPR026057 GO:0016740
Lal17g1591 423 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 11 423 IPR029962 GO:0016413
Lal17g1591 423 PANTHER PMR5 DOMAIN, PC-ESTERASE, PROTEIN TRICHOME BIREFRINGENCE-LIKE 32/46-RELATED 11 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1591 Lal-Chr17 17315410 17319027 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1591 - - gmx:100782397 656.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1591 17 17315410 17319027 Lal17g1591 17 17315410 17319027 ECH
Lal17g1591 17 17315410 17319027 Lal22g0211 22 1302065 1305492 PCT
Lal22g0211 22 1302065 1305492 Lal17g1591 17 17315410 17319027 PCT