Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0058 ATGGCACTTGAATCATGCCAACTTCTTCTAACAGGTTCTAGGTTATCTTACATTTCACACCCAAAGAGAATAATCCCAATCAAATTTACACCATCAGCTTCAAACACTGCATACCCATTTCCCTCACTCTCCAAAAGCTTTCTCCTTTCTACTTATAATAACACCTCTTCAAATACCAATTTATTTGGTAGAACCCGCTTGTTGAGGTGCTTAGGTACTAGCAGTGGTGGCGATTCTTTGAATGGAACAAATTCTGTTCCCAAAGTGAATTTCAACTTTATACAGCAATTGCTGAACAGGGGATTCATTTTGGCTGCAACTGTTTGTGGGATACTGGTTTTTGGATGTCGTCGAGTTCTCGCTGTTGAAGGTGTTGTCAATGCTGCATATGGTGTTATTGACCAGACCATACTTTTGCTTAAGACCACTTGGCCTAAATTGTTGCCATTTCTTCGTATGTTTAAGGAGCATGGTTTAGTGTTGGCACTGCTTTTGAGTCTTTCCGCTTTTTTCTCCATGGCTGAGACTTCAATTACTACACTTTGGCCTTGGAAGGTTCGAGAGTTGGCTGAAAAGGAATCTGAAAATGGCGTCTTTAGACTACTCCGAAGTGATGTTACTCGATTCCTTACAACTATACTTATTGGCACAACTGTGGTCAATATTGGGGCAACTGCTCTGGTCACAGAAGCTGCAACTGCAATATTTGGCGAAGCTGGTGTTAGTGCAGCTACAGGAGTGATGACTGTTGCCATTTTACTTCTCACTGAAATCACTCCAAAAAGTATAGCAGTTCATAACCCCACAGAGGTTGCTCGATTTGTGGTCAGGCCAGTGGCATGGCTTTCCGTGGTGTTGTATCCTGTTGGAAGAGTTGTTACTTATCTTTCAATGGGGATGCTGAAATTACTTGGCTTAAAAGGAAGAAGCGAACCGTATGTAACTGAAGACGAGCTAAAATTGATGCTAAGGGGTGCAGAATTAAGCGGGGCCATAGAGGAGGAAGAACAGGATATGATTGAAAATGTGTTGGAGATAAAAGACACACATGTTAGAGAGGTTATGACACCACTTGTCGATGTTGTTGCAATTGATGCAAGTTTAAGCCTTGTAGATTTTCATGACTTGTGGGTCACACATCAGTACTCAAGGGTACCTGTTTTTGAGCAACGTGTTGATAACATAATGGGCATAGCGTATGCAATGGATCTGCTAGATTATGTACAAAAGGGTGAATTGCTAGAAAGTACTACTGTTGGAGATATGGCTCACAAGCCTGCATATTTTGTACCTGATTCAATGTCTGTTTGGAATCTTCTTAGAGAGTTCAGAATCAGGAAGGTTCACATGGCTGTCGTTCTTAATGAATATGGTGGAACTGTGGGAATTGTAACTCTTGAAGATGTTGTTGAGGAAATTGTTGGTGAAATCTTTGATGAGAATGACTCAAAGGAGGAGATACAGAAAAAAACTGGCTACATAGTAATGCGAGCCGAGGGTGTATTTGACGTGGATGCAAACACATCTATTGATCAGCTCTGTGAAGATTTGAACATCAAGATGCCAGAGGAGGGTCACCAGTATGAGACTGTATCGGGCTTTGTATGTGAAGCATTTGGATACATCCCGAGGACAGGGGAGTGCATCAAAGTGGTTCTTGAAAGGGAAGATGAAGACGAAAATGATGAGTCCAATGGTGATCACCAGGATAAGAAGGAGAAGAACCACACTTTCAAACTTGAGATACTAGCAGGAAATGCCAGAAAAGTGAGTGCTGTTCGGTTTGAAAGGATAAATGGTGATGACGAAATGGTGCAGTCTAAGGCAGTAACTCGTGTGCTCCCGAAAATCACGAAAAGAAAATGGAGCGGTGATGAGGATTCGGATGATGCAGCAGAGTATGACGGAAATGCATTTGCAAAGAAAACACAGAATGACATGTCTAATGAACATGTTGATGATTTGGAAAATTTTGGCATGGAAGCTGCAACATCGCATTCTCTGGCTTGCTTGACCACCTCAAAATCTATAATTACCAAAACCAAATCAAAGGTGCTTCGTTTTCCTCTCAGACAAAGTTTCCATTTTTCAGTTAACAAAGAAACAAGAACAAAAAGGGTAGAAGCTATAAACGATGTAAACACAATACTACTTCACCCTGCTCCTGTTGAACTCTCATGGCAAATTATCGCCGGAGCTATTGCTGGGGTTACACCTTTTGTGGTAGCGGGGATTGAATTTAGCAAAAGAATTATAGCTCAAAAAAGATGTGAGGAGTGTGGAGGGTCAGGGCTTGTTCTTATGGAGGAAAAGGACTATGTCCGTTGCCCTGGATGTGGTGGGTTTCTTCCTTGGCAGTCATGGAAAAGATTCTTTTCTGGTTAA 2385 0.4168 MALESCQLLLTGSRLSYISHPKRIIPIKFTPSASNTAYPFPSLSKSFLLSTYNNTSSNTNLFGRTRLLRCLGTSSGGDSLNGTNSVPKVNFNFIQQLLNRGFILAATVCGILVFGCRRVLAVEGVVNAAYGVIDQTILLLKTTWPKLLPFLRMFKEHGLVLALLLSLSAFFSMAETSITTLWPWKVRELAEKESENGVFRLLRSDVTRFLTTILIGTTVVNIGATALVTEAATAIFGEAGVSAATGVMTVAILLLTEITPKSIAVHNPTEVARFVVRPVAWLSVVLYPVGRVVTYLSMGMLKLLGLKGRSEPYVTEDELKLMLRGAELSGAIEEEEQDMIENVLEIKDTHVREVMTPLVDVVAIDASLSLVDFHDLWVTHQYSRVPVFEQRVDNIMGIAYAMDLLDYVQKGELLESTTVGDMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGIVTLEDVVEEIVGEIFDENDSKEEIQKKTGYIVMRAEGVFDVDANTSIDQLCEDLNIKMPEEGHQYETVSGFVCEAFGYIPRTGECIKVVLEREDEDENDESNGDHQDKKEKNHTFKLEILAGNARKVSAVRFERINGDDEMVQSKAVTRVLPKITKRKWSGDEDSDDAAEYDGNAFAKKTQNDMSNEHVDDLENFGMEAATSHSLACLTTSKSIITKTKSKVLRFPLRQSFHFSVNKETRTKRVEAINDVNTILLHPAPVELSWQIIAGAIAGVTPFVVAGIEFSKRIIAQKRCEECGGSGLVLMEEKDYVRCPGCGGFLPWQSWKRFFSG 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0058 794 ProSiteProfiles CNNM transmembrane domain profile. 150 336 IPR002550 -
Lal22g0058 794 ProSiteProfiles CBS domain profile. 355 416 IPR000644 -
Lal22g0058 794 ProSiteProfiles CBS domain profile. 422 480 IPR000644 -
Lal22g0058 794 CDD CBS_pair_CorC_HlyC_assoc 350 471 IPR044751 -
Lal22g0058 794 SMART cbs_1 360 409 IPR000644 -
Lal22g0058 794 SMART cbs_1 426 474 IPR000644 -
Lal22g0058 794 Pfam CBS domain 351 409 IPR000644 -
Lal22g0058 794 Pfam CBS domain 419 474 IPR000644 -
Lal22g0058 794 Pfam Transporter associated domain 496 598 IPR005170 -
Lal22g0058 794 MobiDBLite consensus disorder prediction 555 575 - -
Lal22g0058 794 SUPERFAMILY FAD-binding/transporter-associated domain-like 493 601 IPR036318 GO:0050660
Lal22g0058 794 Pfam Cyclin M transmembrane N-terminal domain 160 336 IPR002550 -
Lal22g0058 794 PANTHER BNAC03G73630D PROTEIN 88 657 - -
Lal22g0058 794 Gene3D - 330 485 IPR046342 -
Lal22g0058 794 SUPERFAMILY CBS-domain pair 338 477 IPR046342 -
Lal22g0058 794 SMART CorC_HlyC_2 495 599 IPR005170 -
Lal22g0058 794 PANTHER HEMOLYSIN-RELATED 88 657 - -
Lal22g0058 794 Gene3D - 488 599 IPR016169 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0058 Lal-Chr22 348830 363480 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0058 - - gmx:100778907 979.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0058 22 348830 363480 Lal22g0058 22 348830 363480 ECH
Lal18g1610 18 17555438 17563770 Lal22g0058 22 348830 363480 LSH