Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1610 ATGGCACTTGAATCATGGGTACTCGGTCACCAACTTCTCCTAACAGATTATAGGTTACCTTACATTTCACATTCAAAGAGAATACTCCCAATCAAAGTTGCATTAGCTACAAACACTGCATACCCATTTCCCTCACTCTCCAAAAGCTTTCTCCTTTCTAGTTATAACAATACCAATGTATTTTGTGGCACTCGCTTGTTGAGGTGTTTAGGTACTAGCAGTGTTGGTGATTCTTTGAATGGAACAAATTCTGTTTCCAAAGTGAATTTGAACTTTATACAGCAATTGCTGAACAGGGGAATCATTTTGGCTGCAACTGTTTGTGGGATATTCGTTTTTGGATGTTGGCGTGCTCTTGCTGTTGAAGATGTTGCCAATGCTGGACATAGGGTTATTGATAAGAGCATTCTTTTGCTTAAGAACACTTGGCCTAGAGTGTTGCCGGTTCTTCGTATGTTTAAGGAGCATGGTTTTGTGCTGGCACTGCTTTTGAGTCTTTCGGCTTTTTTCTCAATGGCCGAGACTTCAATTACTACACTTTGGCCTTGGAAGGTTCGTGAGTTGGCTGAAAAGGAATCTGAAAATGGCGTCTTCAGACTACTCCGAAGTGATGTTACTCGATTCCTTACAACTATACTTATTGGCACAACTGTGGTCAATATTGGGGCAACAGCTTTGGTCACAGAAGCTGCAACTGCAATATTTGGTGAAGCTGGTATTAGTGCAGCTACAGGAGTGATGACTGTTGCCATTTTACTTCTCACTGAAATCACTCCAAAAAGTATAGCAGTTCATAATGCAACGGAGGTAGCTCGGTTTGTGGTCAGGCCAGTGGCTTGGCTTTCCGTGGTGTTGTATCCTGTTGGAAGAGTTGTTACTTATCTTTCAATGGGGATGCTTAAATTGCTTGGCTTAAAAGGAATAAGCGAACCATATGTAACTGAAGACGAGCTAAAATTGATGTTAAGGGGTGCAGAATTAAGTGGGGCCATAGAGGAGGAAGAACAGGATATGATTGAAAACGTTTTGGAGATAAAAGACACACATGTCAGAGAGGTTATGACACCACTTGTTGATGTTGTTGCTATTGATGTGAGTTTAAGCCTTTTAGATTTTCATGACTTGTGGGTCACACATCAGTACTCAAGGGTACCTGTTTTTGAGCAACGTGTTGATAACATAATGGGCATAGCATATGCAATGGAACTGCTAGATTATGTACAGAAGGGTGAGTTGCTAGAAAGTACTACAGTTGGAGATATGGCTCACAAGCCTGCATATTTTGTACCTGATTCAATGTCTGTTTGGAATCTTCTTAGAGAGTTTAGAATCAGGAAGGTTCACATGGCCATTGTTCTTAATGAATATGGTGGAACTGTGGGAATTGTAACTCTTGAGGATGTTGTTGAGGAAATTGTTGGTGAAATCTTTGATGAGAATGACTCAAAGGAGGAGATACAGAAAAAAACTGGCTACATTGTAATGCGAGCCGATGGTGTATTTGATGTGGATGCAAACACATCTATTGATCAGCTCTCTGAAGATTTGAACATCAAGATGCCAGAGGGTCACCAATATGAGACTGTATCGGGCTTTGTATGTGAAGCATTTGGATACATCCCGAGGACAGGAGAGTGCATCAAAGTGGTTCTTGAAAGGGAAGAGGAAGAGGAAGATGATGAGTCCAATGCTGTCCACCAGGATCAGAAGGAGAAGAACCACATTTTCAAAGTTGAGATACTAGCAGGAAATGCTCGAAAGGTGCGTGCTGTTCGGTTTGAAAGGATAAATGGTGATGATGAGATGGTGCATTCGAAAGAAGTGACTCGCGTGTTCCCGAAAATCTCAAAAAGAAAATGTAGTGATGATGAGGATGATGCACTAGAGTACGACGGAAATGCATTTGCAAAGAGAACAAGGGATGACATGTGTAATGAATATGTAGATGATTTAGAAAATTGCAACACAGATTAA 1974 0.4103 MALESWVLGHQLLLTDYRLPYISHSKRILPIKVALATNTAYPFPSLSKSFLLSSYNNTNVFCGTRLLRCLGTSSVGDSLNGTNSVSKVNLNFIQQLLNRGIILAATVCGIFVFGCWRALAVEDVANAGHRVIDKSILLLKNTWPRVLPVLRMFKEHGFVLALLLSLSAFFSMAETSITTLWPWKVRELAEKESENGVFRLLRSDVTRFLTTILIGTTVVNIGATALVTEAATAIFGEAGISAATGVMTVAILLLTEITPKSIAVHNATEVARFVVRPVAWLSVVLYPVGRVVTYLSMGMLKLLGLKGISEPYVTEDELKLMLRGAELSGAIEEEEQDMIENVLEIKDTHVREVMTPLVDVVAIDVSLSLLDFHDLWVTHQYSRVPVFEQRVDNIMGIAYAMELLDYVQKGELLESTTVGDMAHKPAYFVPDSMSVWNLLREFRIRKVHMAIVLNEYGGTVGIVTLEDVVEEIVGEIFDENDSKEEIQKKTGYIVMRADGVFDVDANTSIDQLSEDLNIKMPEGHQYETVSGFVCEAFGYIPRTGECIKVVLEREEEEEDDESNAVHQDQKEKNHIFKVEILAGNARKVRAVRFERINGDDEMVHSKEVTRVFPKISKRKCSDDEDDALEYDGNAFAKRTRDDMCNEYVDDLENCNTD 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1610 657 Pfam CBS domain 418 473 IPR000644 -
Lal18g1610 657 SMART CorC_HlyC_2 494 597 IPR005170 -
Lal18g1610 657 Pfam Transporter associated domain 495 596 IPR005170 -
Lal18g1610 657 Pfam Cyclin M transmembrane N-terminal domain 159 335 IPR002550 -
Lal18g1610 657 Gene3D - 329 484 IPR046342 -
Lal18g1610 657 ProSiteProfiles CBS domain profile. 421 479 IPR000644 -
Lal18g1610 657 CDD CBS_pair_CorC_HlyC_assoc 349 470 IPR044751 -
Lal18g1610 657 SUPERFAMILY CBS-domain pair 337 476 IPR046342 -
Lal18g1610 657 PANTHER BNAC03G73630D PROTEIN 83 654 - -
Lal18g1610 657 ProSiteProfiles CNNM transmembrane domain profile. 149 335 IPR002550 -
Lal18g1610 657 SUPERFAMILY FAD-binding/transporter-associated domain-like 492 599 IPR036318 GO:0050660
Lal18g1610 657 Coils Coil 551 571 - -
Lal18g1610 657 Gene3D - 491 594 IPR016169 -
Lal18g1610 657 PANTHER HEMOLYSIN-RELATED 83 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1610 Lal-Chr18 17555438 17563770 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1610 - - gmx:100778907 988.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1610 18 17555438 17563770 Lal18g1610 18 17555438 17563770 ECH
Lal18g1610 18 17555438 17563770 Lal22g0058 22 348830 363480 LSH