Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1354 ATGGAAAGTGGTGGTGGTGGTTTGGGTATGTTGAATGAACTCATATCTCTCCTTCAACAATCTTTAGATTCTTACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACTCACATCAACAACAACATCAATCTTCTTTAATTCTTAATAATCAACAAACTCTCATCCTTCCACCTCTTCCTACCAGATGGACCTCCCTTGATATTGAAGAGGGCTCCGTAAATGATTGCTGTAGCCTTGTAATGCCAGCTGGAAAGTCTGGTAGTTTCAGGATGGTGGAGCCTATAAAGCCTCCTCCTACCAAGAAGTCTCATAGAGATCGGAGCCGGGGCAAATCAACTGGAAGGTCCTGTGCAACTGAAGTTCTAGAACAAGAAATTTGGAAAGCTTTTCCTGAAGATTTATTTGAGGCTGTGATTGCACGACTTCCTGTTGCCACATTTTTCCGCTTCCGCTCTGTATGCCGGCAATGGAACTCTTTGCTGACTTCTCAAAGTTTTTCTCAGCTTTGTGCTGAAGTGCCACAACAACATCCCTGGTTTTACACCATAATTCATGAAAATGTGAATTCAGGAGCCATGTACGACCCTTCTTTGAAAAAATGGCATCATCCCACTATTTCAACACTGCCCTCAAAATTGATCATTTTACCAGTGGCTTCTGCTGGGGGTCTGGTTTGCTTTCTCGACATTGATCATCGAAACTTCTATGTTTGCAACCCACTGACTCAATCCTTCAAGGAGTTGCCAGCTCGGTCAGTTAAGGTCTGGTCTCGTGTTGCTGTAGGGATGATCACAAACAGAAAGCCAACTGGTTCAGGCTACAAGATCATGTGGGTGGGTTGTGATGGTGAGTATGAAGTTTATGACTCACTGAGAAATTCTTGGAGTCGTCCAGGAAGCTTGCCTGCAGGTATGAAGCTTCCTTTATCACTCAACTTTAGGTCACAAGCTGTCTCTATTGACAGCACACTTTACTTCATGCGTTTGGATCCGGAAGGGATCGTTTCTTACAATATGGCAACCGGGGTTTGGAAACAGTACATAATCCCCGCGCCATTGTATCTGACTGACCACACCCTGGCTGAGTGTGACGGCCATATCATGCTCGTGGGTTTGCTCACGAAGAATGCGGCTACATGCGTATGCATATGGGAGCTGCAAAGAATGACACTATTGTGGAAGGAGGTTGACAGAATGCCAAACATATGGTGCTTGGACTTTTACGGAAAGCACGTTCGAATGACTTGCCTTGGAAACAAAGGCTTGCTCATGTTGTCCTTGAGATCGAAACAAACGAACCGATTGGTTACTTACAACATAGCAAGTAAGGAATGGCTGAGGGTTCCTGGGTGTGTGGTGCCATGTGGGAGAAAACGGCAATGGATAGCGTGTGGTACTGCATTTCATCCATGCCTGACTGCAATGGCTTGA 1443 0.4484 MESGGGGLGMLNELISLLQQSLDSYNNNNNNNNNNNNNNNSHQQQHQSSLILNNQQTLILPPLPTRWTSLDIEEGSVNDCCSLVMPAGKSGSFRMVEPIKPPPTKKSHRDRSRGKSTGRSCATEVLEQEIWKAFPEDLFEAVIARLPVATFFRFRSVCRQWNSLLTSQSFSQLCAEVPQQHPWFYTIIHENVNSGAMYDPSLKKWHHPTISTLPSKLIILPVASAGGLVCFLDIDHRNFYVCNPLTQSFKELPARSVKVWSRVAVGMITNRKPTGSGYKIMWVGCDGEYEVYDSLRNSWSRPGSLPAGMKLPLSLNFRSQAVSIDSTLYFMRLDPEGIVSYNMATGVWKQYIIPAPLYLTDHTLAECDGHIMLVGLLTKNAATCVCIWELQRMTLLWKEVDRMPNIWCLDFYGKHVRMTCLGNKGLLMLSLRSKQTNRLVTYNIASKEWLRVPGCVVPCGRKRQWIACGTAFHPCLTAMA 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1354 480 Gene3D - 131 170 - -
Lal21g1354 480 Gene3D - 171 470 IPR015915 GO:0005515
Lal21g1354 480 Coils Coil 15 35 - -
Lal21g1354 480 MobiDBLite consensus disorder prediction 92 120 - -
Lal21g1354 480 SMART fbox_2 134 174 IPR001810 GO:0005515
Lal21g1354 480 Pfam F-box domain 134 170 IPR001810 GO:0005515
Lal21g1354 480 MobiDBLite consensus disorder prediction 23 49 - -
Lal21g1354 480 ProSiteProfiles F-box domain profile. 128 173 IPR001810 GO:0005515
Lal21g1354 480 SUPERFAMILY Galactose oxidase, central domain 195 461 IPR011043 -
Lal21g1354 480 PANTHER BNAA07G08860D PROTEIN 64 480 - -
Lal21g1354 480 PANTHER F-BOX/KELCH-REPEAT PROTEIN 64 480 - -
Lal21g1354 480 SUPERFAMILY F-box domain 125 204 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1354 Lal-Chr21 16947542 16950686 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1354 - - gmx:100810179 787.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1354 21 16947542 16950686 Lal14g1141 14 13563293 13566589 PCT
Lal14g1141 14 13563293 13566589 Lal21g1354 21 16947542 16950686 PCT