Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1141 ATGGCTGCTCTTGCTCTACTAGAGCTGGGAGCACTGGAGCAGCAACCCTTCCTGAACATTGATAATAACTCTGTAGATAGCTGCAGTGACCTGTCAATGACAGCTGGAAGTTCTGGAAGCTCCAGAGTGATTGAGCTGCCAAAGCATCCATCTACTAAGAAGTCTCGAAGAAATCAGAGCAGAGGAAAATCATCAAGTAGGCCATTTATGGATCAACAAGTATGGAAAGATTTTCCTGAAGATTTATTTGAGGCTGTGATTGCACGGCTTCCCATTGCCACATTTTTCCGTTTCCGTGCTGTATGCCAGCGATGGAATTCCTTGCTGACATCTAAAAGTTTTTCCCAGCATTGTGTTCAAGTCCCACAGGCAAACCCATGGTTTTACACAGTAACTGGTGAATGTTTGAATTCTGGGTTCATGTATGACCCTTCTGTGAAAAAATGGCATCATCACACTTTTTCAACCAGGACTGAATTCTGTGTTCAAGTCCCAGTGGCTTCTGCTGGCGGTCTCATTTGCTTTACTGGCTTTGATCATCGAGACTACTGTGTCTGTAACCCGTTGAATCAATCATTCACAGAGTTACCAATTCGGCCAAGTAAGTCCCATTCCCAATGTTATCGCGCTGTAGGGATGACAGTAAATGGGAACTCAACTGATGCAGGCTACAAGATCCTATTGGTACATGCTAATGGAGATTATGAAATTTATGACTCGTTGAGAAAGTCTTGGAGTCATCAAGGAAACATGCCTGCTGGTATCAAGCGCCCGGTGACAGTCAACTTTGGTTCATGTGTTTCAGTTGACAGCACAATTTACTTCACACGTTCATACCCAGAAGCGATTATATCCTTTGATATGGAAACTGAGGTTTGGAAACAGAACATAATCCCATCGCCATCTCATGTGATTGACCATGCGCTGGCTGAGTACAATGGCCGGATTATGCTAGTGGGGTTGCTTGGGAAGAATGCAGCCACATGTGTATGCATATGGGAGTTGCAGCAGATGACACTCTTGTGGAAGGAGGTTGACAGAATGCCAAATGAGTGGTGCTTGGAGTTTTATGGGAAGGCCGTTATAATGACATGCTTGGGGAACAGAGGTGGCCTGCTCATGTTGTCCTTGCGATCAAGATTCTCCATGAGATCAGTATTAGTGAACCGCTTGGTTAGTTACAACATGGCAAGTAGGGAATGGCTGCAGGTTCCTACATGTAAGGTGCCAGGTGGAAGAAAAAGGCAATGTGTATCATATGGTACTGCATTTTATCCATCGCTAACTTCAATGGCTTGA 1299 0.4465 MAALALLELGALEQQPFLNIDNNSVDSCSDLSMTAGSSGSSRVIELPKHPSTKKSRRNQSRGKSSSRPFMDQQVWKDFPEDLFEAVIARLPIATFFRFRAVCQRWNSLLTSKSFSQHCVQVPQANPWFYTVTGECLNSGFMYDPSVKKWHHHTFSTRTEFCVQVPVASAGGLICFTGFDHRDYCVCNPLNQSFTELPIRPSKSHSQCYRAVGMTVNGNSTDAGYKILLVHANGDYEIYDSLRKSWSHQGNMPAGIKRPVTVNFGSCVSVDSTIYFTRSYPEAIISFDMETEVWKQNIIPSPSHVIDHALAEYNGRIMLVGLLGKNAATCVCIWELQQMTLLWKEVDRMPNEWCLEFYGKAVIMTCLGNRGGLLMLSLRSRFSMRSVLVNRLVSYNMASREWLQVPTCKVPGGRKRQCVSYGTAFYPSLTSMA 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1141 432 Gene3D - 75 114 - -
Lal14g1141 432 MobiDBLite consensus disorder prediction 31 45 - -
Lal14g1141 432 TIGRFAM F_box_assoc_1: F-box protein interaction domain 170 335 IPR017451 -
Lal14g1141 432 SMART fbox_2 78 118 IPR001810 GO:0005515
Lal14g1141 432 SUPERFAMILY Galactose oxidase, central domain 139 414 IPR011043 -
Lal14g1141 432 Pfam F-box domain 75 114 IPR001810 GO:0005515
Lal14g1141 432 ProSiteProfiles F-box domain profile. 72 117 IPR001810 GO:0005515
Lal14g1141 432 MobiDBLite consensus disorder prediction 31 68 - -
Lal14g1141 432 SUPERFAMILY F-box domain 67 156 IPR036047 GO:0005515
Lal14g1141 432 Gene3D - 129 422 IPR015915 GO:0005515
Lal14g1141 432 PANTHER BNAA07G08860D PROTEIN 27 431 - -
Lal14g1141 432 PANTHER F-BOX/KELCH-REPEAT PROTEIN 27 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1141 Lal-Chr14 13563293 13566589 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1141 - - gmx:100775721 523.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1354 21 16947542 16950686 Lal14g1141 14 13563293 13566589 PCT
Lal14g1141 14 13563293 13566589 Lal21g1354 21 16947542 16950686 PCT