Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1348 ATGGGTGTTGTCATAGATCAAAAATGTAATAGTGTATGTATTCAATCACAAGAACACAACATTGATTTCTTCCACTCTTTACATGATGACCTTGTTCTCACTATCTTATCAAAGCTTAGCTCCACTTCAACCACCCCTTCTGATTTCATCACAGTTTTAATAACATGTAGTAAAACATTTGCAGTAAAAGCGAAAAAGTGGTGTGATTCTTCTCACCATTTCCTTAAACAGTGTTCTGATGCTGGAAATATCCATGATTCGGTTTTACTGTTTGCAAAACCGAGGGAGTGGCACTTGTTTAATGGCGAAGGCGGCGATGAAGTCTCACGCATAGGCATTGTTTTCCTTGGGGTGATACAATTCAACGGAAGTAGTAGAACAAAAAACGACAAGAACTTTGAATCAGGAATTGCACTATGCGCACGCGCTGCATTCCTGGGCCATATCGACGCGCTTCGTGAGTTAGGTCACTGCTTGTGGGGCCTACCTCCGGTTCAGAACCCGGGGCTTACTACAAATCACAGGGTTCGGTTCATGAGAGAAACAGGGTGTACATCACATAGTGATTATGGTTTTAACTTACCGACTCAGGAGCCTCACCCTGTGAACCAGTTCATGAAGGAATGGTTTGCAGTTCGGTCCAATTCGGGAATTAGGCTTTGTTCATATTTGGGTTGTGGTAGACCGAAGACAAGAAAGAACGAGTTTCTTAGATGCTCGTTGATTGGTTTGATGATTTATTGTTCACGAGCATATCAAGCGATTCATTGGAGGTTGGGACATAAGGTAGGTTGTGTCTCTCTTGCGAGGTATTATCATGATTTTGATAGTGATGATGACAACAATAATAATGATGATATTGATAGATATAATGATAACAATAATAACAATGATATTAATAGCGATAATGATATGGTGGTAGTTTGA 927 0.4035 MGVVIDQKCNSVCIQSQEHNIDFFHSLHDDLVLTILSKLSSTSTTPSDFITVLITCSKTFAVKAKKWCDSSHHFLKQCSDAGNIHDSVLLFAKPREWHLFNGEGGDEVSRIGIVFLGVIQFNGSSRTKNDKNFESGIALCARAAFLGHIDALRELGHCLWGLPPVQNPGLTTNHRVRFMRETGCTSHSDYGFNLPTQEPHPVNQFMKEWFAVRSNSGIRLCSYLGCGRPKTRKNEFLRCSLIGLMIYCSRAYQAIHWRLGHKVGCVSLARYYHDFDSDDDNNNNDDIDRYNDNNNNNDINSDNDMVVV 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1348 308 SUPERFAMILY HIT/MYND zinc finger-like 220 271 - -
Lal21g1348 308 PANTHER MYND DOMAIN-CONTAINING 8 159 IPR044508 -
Lal21g1348 308 PANTHER MYND DOMAIN-CONTAINING 179 282 IPR044508 -
Lal21g1348 308 MobiDBLite consensus disorder prediction 288 308 - -
Lal21g1348 308 Gene3D - 221 272 - -
Lal21g1348 308 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 8 159 - -
Lal21g1348 308 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 179 282 - -
Lal21g1348 308 MobiDBLite consensus disorder prediction 282 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1348 Lal-Chr21 16852417 16854254 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1348 - - gmx:100798136 236.498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1348 21 16852417 16854254 Lal14g1134 14 13480827 13482668 PCT
Lal14g1134 14 13480827 13482668 Lal21g1348 21 16852417 16854254 PCT