Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1134 ATGAAAACAAGAAGAGGGTTGTGTTATCCTGAACCAGTTCTAGGTTCAACAAAGATGTGTTCTTCAAATTATGGTATACACAAGAGAAAAAAGAAGGACATGCATCATCATCATCATCATCATCTTCATCATTTCAATAACAAAGAGTCTGTTTTTGTTACCAATAAAAAGCAGAAGAAATTTCAAAACAAAGTTTCTACGGAAGAATATGATTTCTTCGAGTCTTTGCCTGATGATCTTGTAATATCTATCTTCACCAAGCTTAGCTCCACAGCTTCTTCTCCTTCTGACTTTGTCAATGTTTTAATAACGTGTAAGAGATTAAAGAGTTTAGCACTTCATTCTCTTGTTTTATCCAAAGCCTCTTCTAGAATGTTCTCTGTTAAAGCCAAAAACTGGTCTGAATCTGCACACCGATTTCTTAAACAGTGTGCTGATGCGGGAAATGTTGATGCCTGTTATACTCTTGGCATGATTCGCTTCTACTGTTTGAAAAACAGAGCTAGCGGAGCGTCGCTGATGGCTAAGGCGGCGATGAACTCTCACGCGCCGGCACTTTATTCTCTGGCTGTTATACAGTTCAACGGCAGCGGTGGAACTAAAAACGACAAGGACCTCCGTGCCGGCGTGGCGCTTTGTGCACGTGCCGCCTTCCTCGGCCACGTTGATGCTTTGCGGGAGCTAGGTCACTGCTTGCAAGACGGTTACGGTGTTAGACAGAACATCGTTGAGGGAAGGAGATTTCTCATCCAGGCTAACGCTCGTGAACTCGCCGCCGTGTTATCCCCTCCGGAAACCGCCGCGGCGAGGCAGTGGTATTGGAGTTTCAATCCACGGTTAGGGCACTTAGGATGCCCGTTGTTGAGCGATTTTGGATGCAACGTTCCGGCACCGGAGGCTCACCCGGCGAGTAGGTTCATGTTGGAGTGGTTTTCTGTTAATGGTGGATCACCGGGTTCGGGTCTCAGATTATGTTCTCACGTGGGTTGTGGGCGACCCGAAACGAGGAACCACGAGTTTCGAAGGTGCTCGGTTTGTGGGGCGGTGAATTATTGTTCACGCGCGTGCCAAGCGCTTGATTGGAAATTCCGGCATAAGGCGGAGTGCGCCCCCGTTGATCGTTGGCTCGATGAGGAGGGAGAAGAGGTTGACGGTGACGGAGATGTGGTTATGGTGGTGGATAGTTAG 1188 0.4764 MKTRRGLCYPEPVLGSTKMCSSNYGIHKRKKKDMHHHHHHHLHHFNNKESVFVTNKKQKKFQNKVSTEEYDFFESLPDDLVISIFTKLSSTASSPSDFVNVLITCKRLKSLALHSLVLSKASSRMFSVKAKNWSESAHRFLKQCADAGNVDACYTLGMIRFYCLKNRASGASLMAKAAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNIVEGRRFLIQANARELAAVLSPPETAAARQWYWSFNPRLGHLGCPLLSDFGCNVPAPEAHPASRFMLEWFSVNGGSPGSGLRLCSHVGCGRPETRNHEFRRCSVCGAVNYCSRACQALDWKFRHKAECAPVDRWLDEEGEEVDGDGDVVMVVDS 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1134 395 Gene3D - 318 373 - -
Lal14g1134 395 ProSiteProfiles Zinc finger MYND-type profile. 327 369 IPR002893 -
Lal14g1134 395 SUPERFAMILY F-box domain 61 129 IPR036047 GO:0005515
Lal14g1134 395 SUPERFAMILY HIT/MYND zinc finger-like 324 373 - -
Lal14g1134 395 SUPERFAMILY HCP-like 132 253 - -
Lal14g1134 395 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 54 395 - -
Lal14g1134 395 Pfam MYND finger 330 369 IPR002893 -
Lal14g1134 395 Gene3D Tetratricopeptide repeat domain 108 275 IPR011990 GO:0005515
Lal14g1134 395 PANTHER MYND DOMAIN-CONTAINING 54 395 IPR044508 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1134 Lal-Chr14 13480827 13482668 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1134 - - gmx:100798174 545.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1348 21 16852417 16854254 Lal14g1134 14 13480827 13482668 PCT
Lal14g1134 14 13480827 13482668 Lal21g1348 21 16852417 16854254 PCT