Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1332 ATGTTCAAACAAATATTTAGTAAACTTCCTAGAAAATCATCATCAAAAGGTAGTTCTTCTGATAATAATAGTGGAAGAAGCCATGGTGGTGTTAAAAGCAATGATCTTTCTACAAAATCGGCAGGTTCGGCTTCGGCTTCTGTTTCGCAACCCCATCATGGTACTATTAACAACAATAGAGTTCAATTACCAATTGGTGTGAATGAAAGTCAAAACCCTAATGGGAATTTGAGTTTCAGTTCTTATGAAGCATTGCCTGCATTCAGGGCTGTTTCCAATTCCGAGAAGCAGGCATTGTTTATCAACAAGCTGAAAATGTGTAGTGTCGTGTTTGACTTCGTTGATGCTACGAAGAATCTCAAGGAGAAGGAGATTAAGAGGCAGACTTTGGTGGAGCTTGTGGATCATGTGACTTCGGCTAATGCGAAATTCTCAGAGAGCGTGATACAACAAGTTGTGAGAACGGTGTCCGCAAATATATTTAGAATGCTTAGTCCTCAGCTGCGCGAGAACAAGCCTATTGATGGTGTTGAGTTAGATGAGGAGGAGCCTTCAATGGATCCTGCGTGGCCTCATTTGCAGATTGTGTACGAGCTTTTTCTGCGATTTGTGGCTTCACCTGAGCTGGACGTGAAGGTAGCTAAGAGGTTTATTGATCAATCCTTTGTTTTAAGGCTGCTTGATTTGTTTGATTCTGAAGATCCTAGAGAAAGGGAGTACTTGAAAATGACCCTGCACCGAATCTACGGGAAATTTATGGCGCATCGCCCTTTTATCAGGAAAGCAGTCAATAACATCTTTTTTAATTTTATTTTCGAGACCGAGAAGTATAATGGTATTGCTGAATTCCTTGAATTTCTCGGGAGCATCATTAATGGTTTTGCACTGCCTTTGAAAGAAGAGCATAAACTGTTTCTTGTTCGTGTGTTGGTTCCCCTTCACAAACCAAAGAGCTTGGCGATGTATCATCATCAGTTATCTTATTGCATTACTCAGTTTGTGGAGAAAGACTGCAAGCTTGCTGATACCATTATTAGGGGATTATTGAAGTACTGGCCGATAACGAATAGTTCAAAGGAAGTTATGTTCTTGGGTGAGTTGGAAGAAGTCTTAGAAGCAACTCAACCTCCCGAATTCCAGCGTTGTATGATGCCATTATTTCGCCGAATTGCACATTGTTTGAATAGCCCCCATTTTCAGTACGATTGTTTTCTCCATGATCTGGAGGTTATGAGTTCAAATCCTGGAAACAGCCGCTTCACTTTGGAGGTGGCAGAAAGAGCTTTGTTCTTGTGGAACAATGATCACATTGTGAACTTAATCAGACAAAATTGCAAAGTGATATTGCCCATAACCTTTCCTGCATTGGAGAAAAACGCTAGAAGTCATTGGAACCAGGCTGTCCATAGTTTGACTTTAAATGTGCGGAAGATTTTCAACGATATGGATCCCGATCTATCCAAAGAATGCTTGCTAAAGTTTGAAGAAAATGAATCAAAGAAAGATGAAATCAATGAAGGTCGTGAAGCCACTTGGAAGCGCTTAGAGGAGCTTGCCACAAAGAGAGCCGCAAATAGTGAAGCTGTGCTTGTTGGGAGAGTACTCACTCACAACTCTGCAGGTTAG 1626 0.4108 MFKQIFSKLPRKSSSKGSSSDNNSGRSHGGVKSNDLSTKSAGSASASVSQPHHGTINNNRVQLPIGVNESQNPNGNLSFSSYEALPAFRAVSNSEKQALFINKLKMCSVVFDFVDATKNLKEKEIKRQTLVELVDHVTSANAKFSESVIQQVVRTVSANIFRMLSPQLRENKPIDGVELDEEEPSMDPAWPHLQIVYELFLRFVASPELDVKVAKRFIDQSFVLRLLDLFDSEDPREREYLKMTLHRIYGKFMAHRPFIRKAVNNIFFNFIFETEKYNGIAEFLEFLGSIINGFALPLKEEHKLFLVRVLVPLHKPKSLAMYHHQLSYCITQFVEKDCKLADTIIRGLLKYWPITNSSKEVMFLGELEEVLEATQPPEFQRCMMPLFRRIAHCLNSPHFQYDCFLHDLEVMSSNPGNSRFTLEVAERALFLWNNDHIVNLIRQNCKVILPITFPALEKNARSHWNQAVHSLTLNVRKIFNDMDPDLSKECLLKFEENESKKDEINEGREATWKRLEELATKRAANSEAVLVGRVLTHNSAG 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1332 541 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 401 - -
Lal21g1332 541 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 422 539 - -
Lal21g1332 541 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 422 519 IPR002554 GO:0000159|GO:0007165|GO:0019888
Lal21g1332 541 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 85 400 IPR002554 GO:0000159|GO:0007165|GO:0019888
Lal21g1332 541 SUPERFAMILY ARM repeat 98 501 IPR016024 -
Lal21g1332 541 MobiDBLite consensus disorder prediction 1 59 - -
Lal21g1332 541 PIRSF PP2A_B56 1 402 IPR002554 GO:0000159|GO:0007165|GO:0019888
Lal21g1332 541 PIRSF PP2A_B56 416 540 IPR002554 GO:0000159|GO:0007165|GO:0019888
Lal21g1332 541 MobiDBLite consensus disorder prediction 8 59 - -
Lal21g1332 541 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 401 IPR002554 GO:0000159|GO:0007165|GO:0019888
Lal21g1332 541 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 422 539 IPR002554 GO:0000159|GO:0007165|GO:0019888
Lal21g1332 541 Gene3D - 93 518 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1332 Lal-Chr21 16680306 16685139 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1332 K11584 - gmx:100811438 769.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1332 21 16680306 16685139 Lal17g1657 17 17824133 17828161 LSH