Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1657 ATGTTGAAACAAATACTTAGTAAACTTCCTAGAAAGTCTTCTTCTTCATCATCCAAAGGTGGTTCTTCTGAACATGGTGGTGCTAGTAATGGAAGAACTCATGGTGGTGTTAAAAGCAACGATCTTGCCACCAAATCTGTAAATTCTGCTTTGGTTTCGCAACCCCATCATGGTAATATTAACAATAATAGAGCTCAATTATCAATTGGAGTGAATGAAAATCAAAACCCCAATGGGAATTTGAATTTCACTTCTTATGAAGCATTGCCTTCATTCAGGGATGTTCCCAATTCTGAGAAGCAGGCTTTGTTTATCAACAAGCTCAAGATGTGTAGTGTTGTGTTTGACTTCGCCGATGTGACGAAGAACCTTAAGGAGAAGGAGATTAAGAGGCAGACTTTGGTGGAGCTCGTGGATTATGTAACTTCGGCTGATGTGAAATTCTCGGAGAGCGTGATACAGCAAGTTGTGAGAATGGTATCCACAAATATATTTAGGACGCTTAGTCCTCAGCCACGTGACAACAAGCCTGTTGATGGTGTTGAGTTGGAGGAGGAGGAGCCTTCGATGGATCCTGCATGGCCTCATCTGCAGATCGTGTATGAGCTTTTCCTGCGGTTTGTGGCTTCTCCTGAGCTGGATGCAAAGTTGGCTAAGAGGTTCATTGATCAATCCTTTGTTTTGAGGCTGCTGGATTTGTTTGACTCTGAAGATCCTAGAGAAAGGGAGTACTTGAAAATGACACTGCACCGAATATATGGGAAGTTTATGGCGCACCGCCCTTTTCTCAGGAAAGCAATCAATAACATCTTTTTTAATTTTATTTTCGAGACTGAGAAGTATAATGGTATTGCTGAAATCCTTGAAATTCTGGGGAGCATCATTAATGGTTTTGCGCTGCCTTTGAAAGAAGAGCATAAACTGTTTCTTGTTCGCGTGTTGATTCCCCTTCACAAACCAAAGTGCCTAGCAATGTATCATCAGCAGTTGTGTTATTGCATTACTCAGTTTGTGGAGAAAGACTGCAAGCTTGCAGATACCATTATTAGGGGATTATTGAAGTACTGGCCGATAACGAATAGTTCGAAGGAAGTTATGTTCTTGAGTGAGTTGGAAGAAGTCTTGGAAGCAACTCAACCTCCAGAATTCCAGCGCTGTATGATGCCATTATTTCGCCGAATCACCAATTGTTTGAGTAGCCCTCATTTTCAGGTGGCGGAAAGAGCTTTGTTCTTGTGGAACAATGATCACGTTGTGAACTTAATCAAACCAAATTGCAAAGTGATATTGCCCATAATCTTTCCTGCATTGGAGAAAAATGCTAGAAGTCACTGGAATAAGGCTGTACATAGTTTGACTTTAAATGTACAGAAGATTTTCAATGATCTTGATCATGATCTATATAAAGAATGCTTGCAAAAGTTTGAGGAAATTGAATTAAAGAAAGATGAAATCAAAGAAGGTCGGGAAGCCACATGGAGGCACTTAGAGGAGCTTGCCGGAAAGAGACCCGCAAGTAGCGAAGCAATACTTAATGGTAAAACATTCACTCGTAACTCTGCAAGTTAA 1569 0.4073 MLKQILSKLPRKSSSSSSKGGSSEHGGASNGRTHGGVKSNDLATKSVNSALVSQPHHGNINNNRAQLSIGVNENQNPNGNLNFTSYEALPSFRDVPNSEKQALFINKLKMCSVVFDFADVTKNLKEKEIKRQTLVELVDYVTSADVKFSESVIQQVVRMVSTNIFRTLSPQPRDNKPVDGVELEEEEPSMDPAWPHLQIVYELFLRFVASPELDAKLAKRFIDQSFVLRLLDLFDSEDPREREYLKMTLHRIYGKFMAHRPFLRKAINNIFFNFIFETEKYNGIAEILEILGSIINGFALPLKEEHKLFLVRVLIPLHKPKCLAMYHQQLCYCITQFVEKDCKLADTIIRGLLKYWPITNSSKEVMFLSELEEVLEATQPPEFQRCMMPLFRRITNCLSSPHFQVAERALFLWNNDHVVNLIKPNCKVILPIIFPALEKNARSHWNKAVHSLTLNVQKIFNDLDHDLYKECLQKFEEIELKKDEIKEGREATWRHLEELAGKRPASSEAILNGKTFTRNSAS 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1657 522 MobiDBLite consensus disorder prediction 1 40 - -
Lal17g1657 522 MobiDBLite consensus disorder prediction 8 40 - -
Lal17g1657 522 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 89 500 IPR002554 GO:0000159|GO:0007165|GO:0019888
Lal17g1657 522 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 521 - -
Lal17g1657 522 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 521 IPR002554 GO:0000159|GO:0007165|GO:0019888
Lal17g1657 522 Gene3D - 96 499 IPR011989 -
Lal17g1657 522 SUPERFAMILY ARM repeat 102 482 IPR016024 -
Lal17g1657 522 PIRSF PP2A_B56 1 521 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1657 Lal-Chr17 17824133 17828161 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1657 K11584 - gmx:100811438 783.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1332 21 16680306 16685139 Lal17g1657 17 17824133 17828161 LSH