Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1329 ATGTTTTTCTTTTGTTGGTCTCTTATTTTGTTACCAAAGGTACACAATGATGGTAGATCAATAATGAGCACTCATGGAAGGAAGGCTACAATTGGTGACTTCTATGCCGTTATATTGCCATCTCTTCAGCGCCTTCATGGTAGCTCGGAGAAGTTCGAGATTTCTGAAGAAGAGCACTCTGGCATAGACGAAGGTTCAAGTGATGGTAAGAAGATGGTGATTGAAGGAGATGTGAAACTAAAGAATGTTGATTTGCGAAGAGAAGATGAGAACACACGATCACAGTCTTGTCCTTTTTGCCGCGATAGCTTAAGAAGAGTTAATTCCGAGGATCTATGGGTACTAACTTGTGATGAAGATGTTGTTGATACTGAAACAGCTTCAAAGGAGGATTTGTGGCGTTTCTACCTCTATATTAACAAGCTACCTAAGGATCACCATGCACTTTTTCTAATATCCGAATATTGTTTAATGTCTGAGAGTAACGTAACAGACCAGATTTCAGAACCTGATTTGGATCCAGGTCATGAAATTGGGCACATAAAATCAAATGAGGTTATTACTGAATCTACCATTGAAGAAGACGTTAATGTTGCAACGAATCAGATAATTGAACATGCTGATCAAAACGATGTCGTTTGGGGTGACCCTGTTGCTGCTGCTGAAGATGTAAAATCTACAGAGGATAATATGTTTGTGGATGCCTCTGATGAGGTAGAGAATGAAGAAAATGAAGAAAACAAAGTGGAAGGTGATGATCAAGTTATGCATCACCTTGATGGGGTAGGAGATGGTTTCGCCTACTTCAATGGTGAGCTTGAACAGTTGCGTCTTGCGTTGGAGAAGGTCATTGCTGAGAAAGAAAGTATTGTGCAGGAGTACCAGGAAGAAAGAGGAGCATTTGCCCAAGGAGTGTTTGATCTTCATTATGAGCTAAAGGCTCTGACCGGTAAACAGTCATCACTGGATGAAGCTGAAGTTAGGGAAGTAGCTGATGTTCCATTAAAGATAGTAAAAGAATGTTTGGAGTTTGTGAAAACTGCTTCAGAGGAACGACCAAAGAGTGAGGCTACTATAGGTAATCTTCATGAACTTCTTTCTATGAAGGACCGTGAGATAGAGGATCTTAATACAAAAATTGCTCAGTTGACGGCATCCAATGAGAGTTTTCACATTTCATCAGAAGCTCAGCTTGAAAAGGATCGCGATATTGAGATTGCAATAGATAAGACAATATCCTCTCTTGCGACAGTTGTTAATCAGGACCGATTGTTTGATAGTACTCTAAGTGGGAAAGTAGTTTCTGTTGAGGAAGGCACAATGCTTTTAATTGAAAAGTATAATCAGTTTCTTTCTGATATTTATCAAGTTGGGCAAACTTTCTCTGAGGTTGGCTTGGATACTAGAGAGCATGGAAATGGAAACATACTTGTTGATGCATGTGGCGGATTACTGGAACTCAAAAGAAAGGAAGAAGAATTGGTTGAAAAGCTGGCTCGGTTAGAAGATGAAAATAGGAAACTCGTAGAAGAGCTTGACAAGGAAAGCACAATGGTAGTGTCATTAAATACTGAAATTGGAAATATGAAAACAGAACTTGAGCAGGAAAAGATTAAAACTACTAATACCAAAGAAAAGCTTAGTATGGCTGTGACAAAAGGAAAGGCATTGGTACAGCAGCGAGACTCACTAAAGAATTCTCTGGCTGATAATTCCAGAGAGCTTGAGAAATGCTTGACCGAATTACAGGAGATGAAAGTTGCACTAGAAGCTGCTGAGCTTACTAAAGAGGAGTTGGCCCGGAGTGAGAATATGGTTGCATCCCTGCAGGGTTCATTACTACAAAGTAATAAAAACTTAGAACAAATAGAAGAGATATTGTCTCACGCTGAACTTGATCAGCCTGAAATATCTGATACATCAGAGAGACTAAGATGGATTCTGGAGGACAGAAATATGCTTAAGGGTTCCTTCCTGGTGTTATGCAACTTGAAGGATGCTCTATCTCTGTCAGATTTACCAGAACCTATCTCTTCATCAGATTTGGAATCACAAATGATGTGGCTAAGGGATGCTTTTCATACTGCCAGGGATAATATGTATAGTCTGCAGGAAGATATTTCTGCAATCAAGGAAGCATCCTGCAACTATATCGATCGCTTAAGTATTTCGCTTTTGTTGGAATTACAGGAAAAGGAATACCTTCAATCAGAATTAACTGATTTGATGTATGGTTTTGAAGAGCTTTCTGGCAATTACCATCAGATTTCCTTGGAGAAGGATCAGATAGTGAAAACGTTGGTAGATCTTGCTGCCATAAACCTGGAAGATGAAGGGATTGATCAAACCCATTCCAGTACTTCTATGATAATCGATTTATGCTCTCAAGCTATAAAAGGACAGAGTGCTCATTTCTCTAGAGCATCTTCTGTTGATGCTGAGGTGTTTGAAGGGATTCAAAGTCTGTTGTATGTTAGAGATATTGGATTGACGCTGTATGAGGATATACATGAAGAAGATATGCTTATTAGATCAGATGTAAATAAGCTGTCAAATGAGTTGAAAGTGGTATCTGAGGAAGTTATAGCGCTGAAAGAAGAAAGGGGTTCTCTGTTGAAAGATCTTGAACGATCAGAAGAGAAGTCTTCCATGCTGAGGGATAAGTTGTCCATGGCGGTTAAGAAAGGGAAGGGGCTAGTTCAAGATAGAGACAATCTAAAAGGTTTTATAAATGAAAAGAACACAGAGATTGAGCAGTTGAAGTTTGATTTGCAGAAGCAAGAATCAGCAGTTTCTGAATACAGAGACCAGATCGATAGATTATCCTATGATGTTGAAAGCATCCCGAAATTGGAGGCTGGTCTTCTGGAAATTGAAAAGGAAAGGAATCAGTTTGAGCAGTTGTTGATGGATAGCAATAACATGTTACAAAGAGTGGTGGAGTGTGTTGATGGTATCGTTCTTCCTGCTGATCCAGTTTTTGGTGAACCTATAGAAAAGGTGAAGTGGCTTGCTGGTTATGTCAGTGAATGCCAGAATGCTAAGGTACATGTAGAGAAAGAGTTGGAGTTGATAACGGAGGAAGCTGGTATACTTGAATCCAAATTAGCGGAAGCCCAGGCAACCATAAAGTCCCTTGAACAAGGGTTATCTTCTTCAGAGGACAGTGTTTCTCGACTTTCTGAAGAAAAGACAGAGTTAGAACACGAGAGAGCAAGAGCTGAGGAAGAGTTGCAGAAAGTCAATGAAAAGTTTGCTGAAGTTTGTGTTTCTACCAAGTCACTTGAAGATGCCTTATCACAGGCGGAAAAAGATATTTCTGTTCTCTCCAATGAGAAAGAGCAGGCTCGAGTTGGTAGACTTGCTGCAGAGACAGAGTTAGAGAGAGCTAAAGAAGAAGCAGCCAGACATTCAAGCGAACTTGCTGAGGCCAACATGACCATAAAGGATCTAGAAGATAAACTATCTAAGCTAGAGAGTAATGTCAGTTTATTGACTGAAAAATATAATGCCGACCAAGTTTTCAAGACCGACATGGAAATTGAATTGAAGAAGCTGCAAGATGAAGCTGCAAACCATGCAAGCAAATTGGAAGAGGCCTATGCAACTGTTCAATCACTGGAAGATGCATTGCTGAAGGCACAAGATGATATTTCTTCCCTAGAGGATGCGGATAAAACTGCGAAAGAGGAAATATCTTCACTTGGTTTTAAGTTAAAATCATGCATGGATGAGTTAGCTGGAAAGAATGGCAGCTTGGAAAATAAATCTGTAGAACTCATTGGGATCCTTACTGATCTTCAGGTAGTTATGGAAGACAATACCCTATTTCCCAGATTAAAACAATGCTTTGAGAGGAAATGTGAGACTCTGAAAGATATGAGTCTTATTCTGAACAAAATAGGAGACCAAATTGTTGCCATGGCTGCTAAGGGTTCTGAAGGAGACCCTATGAAGAAGGAAGATGCACTTGTGAGAAAAGCATTCTTGGATGGCTTTGAAAATTTTGAAGTTGAATTTGACAACAGAGAGATTGATGGCACTGATATTAACACCTTAATCTCATCAGTTGGAAAGGTTGTGAAAGGGTTTCAATTGAGAAACAAATACATTGCAGATAAGTTTGATGAATTTTCTGATTCTCTTGATGAGATTATTTCTCCTCTCCGTGAAAAACTACTGGAAACAGAGACCACTGTAATGACTGTAGTTGAGGATGTAGAAGTAATGAAAGATAAAGAAAGTATCTTGGAGAAGTTAAAAGAAGAAAAGGAAAATGTTATTGCCACATTAGAGAACAACATTAGTTTGTTGCTATCTGCATGCACTGATGCTACCAGTGACTTGCAGATTGAAAAGTTAAACCCGGAAGCAGATGCACAACCGGAGCTTCAAAAGAACAGCAACTACATGGAAGCCACAGAAAAGTTGAAAACTGCTTCTAAGAAAGCTCAGACTTTGATTAGACAGTTCGAATCTAGAAGCGAGCAGGAAGCTGTGACGATTAAAGATTTGCAGAGTAAATTGAAAGAAACAACAGGTGCTTTTGAATTGGTCACGGATGAAAGAGACTTAAATAAAAGCAGAGTTTTACAACTGGAGTCTGATATTCAAATACTCCAAGATGATTGCAGTGAGCTTAGGAATAAATTGAAAGAAACAACAGATGCTTTTGAATTGGTCACGGATGAAAGGGACTTGCATAAAAACAGAGTTTTGCAACTGGAGTCTGATATTCAATTACTGCAAAATGATTGCAGTGAGATTAGGAATAAATTGAAAGAAACAACAGATGCTTTTGAATTGGTCACGGATGAAAAAGAATTGCGTAAAAACAGAGTTTTGCAATTGGAGTCTGATATTCAGTTACTGCAAAATGATTGCAGTGAACTTAGGGTAAAATTGAAAGAAACATCAGATGCTTTTGAATTGGTCAGGGATGAAAGAGACTTGCATAAAAACAGAGTTTTGCAATTGGAGTCTGATATTCAGTTACAGCAAAATGATTACAGTGAGCTTAGGAATAATTTAGAGGGTTATCATGCCTTAGAGGAAAAATTAAAGGATAAAGAGGCGAAGATTTCATCAATGCACAGTACTTTATTGGCAAAAGATCAAGAGGCAGGAGGTTCCTTTCTTTCAGTGTCTCAGACGAAAGATCTCTTTGACAAGATAGATAGGATCAAAACCCCTATTGCAGAGTCCGGAGATGATATTGAGCCACATGCTTCAAACCCTGCAAAGAAGCTCTTTTATATTATTGATAGCATTACTAGGTTGCAACATCAAATATACTCTTTATCTCATGATAAAGATGAGCTGCAATCAACACTCGAATCTTTGTCTAATGATAAAGAACAGCTGGAATCAACACTGGAAACTAAGGTTCTTGAAATTCAGGATCTCAAGGAGGAAGTGAAACAACTAAATAGAAACTGGGAGGAGTCAAAGATGGTCAAGAATGAATTGTCTGAACTCACTTTTGCTTTAAAAAAAGTAATGGATGTTGCGGGAGCCAGTGATTGGGTTGTAGATAGAAAATCTATGGGTATGAAGGAACTAATACCAGCACTGGAAAAGCATATCATGACCATTCTTTTAGAATCTGAAAATTCAAAATCTGAAGCCCAGGAACTTGGTGTTGAGTTAGTTGGAAGACAGAAGGTGATTGATGAATTAACGACCAAGATTAAATTACTAGAAGATTCACTTCACGAAAGAGCGTCTAAGCCAGAAATTGTCCAGGAAAGGAGTATATTTGAAGCACCATTATTACCTGCTGGGTCTGAGATAACTGAAGTTGAAGAGGGACCACTTGGCAAGAAAGCAGTAACTCCTGTCCCATCAGCTGCCCATGCCCGAAGTATGCGAAAAGGATCTTCTGACCATCTTGCACTTGATATCAATGTCGAATCTGATCATTTAATTAACACTGCATATACCGATGATGACGATAAAGGTCATGTATTCAAGTCTCTAAACACTTCTGGATTTATACCAAAACAAGGAAAGCTCATTGCAGATCGTGTTGATGGAATCTGGGTATCTGGTGGTAGAGTTCTAATGAGTGCTCCCAGAGCTAGACTAGGAGTCATTGGTTATTTGTTCATCTTGCATCTATGGCTATTGGCAACAATCTTGTAG 6144 0.3895 MFFFCWSLILLPKVHNDGRSIMSTHGRKATIGDFYAVILPSLQRLHGSSEKFEISEEEHSGIDEGSSDGKKMVIEGDVKLKNVDLRREDENTRSQSCPFCRDSLRRVNSEDLWVLTCDEDVVDTETASKEDLWRFYLYINKLPKDHHALFLISEYCLMSESNVTDQISEPDLDPGHEIGHIKSNEVITESTIEEDVNVATNQIIEHADQNDVVWGDPVAAAEDVKSTEDNMFVDASDEVENEENEENKVEGDDQVMHHLDGVGDGFAYFNGELEQLRLALEKVIAEKESIVQEYQEERGAFAQGVFDLHYELKALTGKQSSLDEAEVREVADVPLKIVKECLEFVKTASEERPKSEATIGNLHELLSMKDREIEDLNTKIAQLTASNESFHISSEAQLEKDRDIEIAIDKTISSLATVVNQDRLFDSTLSGKVVSVEEGTMLLIEKYNQFLSDIYQVGQTFSEVGLDTREHGNGNILVDACGGLLELKRKEEELVEKLARLEDENRKLVEELDKESTMVVSLNTEIGNMKTELEQEKIKTTNTKEKLSMAVTKGKALVQQRDSLKNSLADNSRELEKCLTELQEMKVALEAAELTKEELARSENMVASLQGSLLQSNKNLEQIEEILSHAELDQPEISDTSERLRWILEDRNMLKGSFLVLCNLKDALSLSDLPEPISSSDLESQMMWLRDAFHTARDNMYSLQEDISAIKEASCNYIDRLSISLLLELQEKEYLQSELTDLMYGFEELSGNYHQISLEKDQIVKTLVDLAAINLEDEGIDQTHSSTSMIIDLCSQAIKGQSAHFSRASSVDAEVFEGIQSLLYVRDIGLTLYEDIHEEDMLIRSDVNKLSNELKVVSEEVIALKEERGSLLKDLERSEEKSSMLRDKLSMAVKKGKGLVQDRDNLKGFINEKNTEIEQLKFDLQKQESAVSEYRDQIDRLSYDVESIPKLEAGLLEIEKERNQFEQLLMDSNNMLQRVVECVDGIVLPADPVFGEPIEKVKWLAGYVSECQNAKVHVEKELELITEEAGILESKLAEAQATIKSLEQGLSSSEDSVSRLSEEKTELEHERARAEEELQKVNEKFAEVCVSTKSLEDALSQAEKDISVLSNEKEQARVGRLAAETELERAKEEAARHSSELAEANMTIKDLEDKLSKLESNVSLLTEKYNADQVFKTDMEIELKKLQDEAANHASKLEEAYATVQSLEDALLKAQDDISSLEDADKTAKEEISSLGFKLKSCMDELAGKNGSLENKSVELIGILTDLQVVMEDNTLFPRLKQCFERKCETLKDMSLILNKIGDQIVAMAAKGSEGDPMKKEDALVRKAFLDGFENFEVEFDNREIDGTDINTLISSVGKVVKGFQLRNKYIADKFDEFSDSLDEIISPLREKLLETETTVMTVVEDVEVMKDKESILEKLKEEKENVIATLENNISLLLSACTDATSDLQIEKLNPEADAQPELQKNSNYMEATEKLKTASKKAQTLIRQFESRSEQEAVTIKDLQSKLKETTGAFELVTDERDLNKSRVLQLESDIQILQDDCSELRNKLKETTDAFELVTDERDLHKNRVLQLESDIQLLQNDCSEIRNKLKETTDAFELVTDEKELRKNRVLQLESDIQLLQNDCSELRVKLKETSDAFELVRDERDLHKNRVLQLESDIQLQQNDYSELRNNLEGYHALEEKLKDKEAKISSMHSTLLAKDQEAGGSFLSVSQTKDLFDKIDRIKTPIAESGDDIEPHASNPAKKLFYIIDSITRLQHQIYSLSHDKDELQSTLESLSNDKEQLESTLETKVLEIQDLKEEVKQLNRNWEESKMVKNELSELTFALKKVMDVAGASDWVVDRKSMGMKELIPALEKHIMTILLESENSKSEAQELGVELVGRQKVIDELTTKIKLLEDSLHERASKPEIVQERSIFEAPLLPAGSEITEVEEGPLGKKAVTPVPSAAHARSMRKGSSDHLALDINVESDHLINTAYTDDDDKGHVFKSLNTSGFIPKQGKLIADRVDGIWVSGGRVLMSAPRARLGVIGYLFILHLWLLATIL 2047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1329 2047 Coils Coil 1176 1231 - -
Lal21g1329 2047 SUPERFAMILY Tropomyosin 1090 1243 - -
Lal21g1329 2047 Coils Coil 613 633 - -
Lal21g1329 2047 Coils Coil 1614 1641 - -
Lal21g1329 2047 Coils Coil 1771 1819 - -
Lal21g1329 2047 Coils Coil 955 975 - -
Lal21g1329 2047 Coils Coil 1022 1084 - -
Lal21g1329 2047 PANTHER - 1630 1779 - -
Lal21g1329 2047 PANTHER - 1546 1595 - -
Lal21g1329 2047 PANTHER - 1119 1168 - -
Lal21g1329 2047 PANTHER - 1229 1553 - -
Lal21g1329 2047 PANTHER - 1779 2047 - -
Lal21g1329 2047 PANTHER - 225 1071 - -
Lal21g1329 2047 PANTHER - 1173 1224 - -
Lal21g1329 2047 PANTHER - 1068 1118 - -
Lal21g1329 2047 Coils Coil 366 386 - -
Lal21g1329 2047 Coils Coil 273 297 - -
Lal21g1329 2047 Coils Coil 1410 1441 - -
Lal21g1329 2047 Coils Coil 232 252 - -
Lal21g1329 2047 Coils Coil 910 944 - -
Lal21g1329 2047 Coils Coil 1092 1168 - -
Lal21g1329 2047 Coils Coil 565 602 - -
Lal21g1329 2047 PANTHER BNAA09G28150D PROTEIN 1068 1118 - -
Lal21g1329 2047 PANTHER BNAA09G28150D PROTEIN 1546 1595 - -
Lal21g1329 2047 PANTHER BNAA09G28150D PROTEIN 1630 1779 - -
Lal21g1329 2047 PANTHER BNAA09G28150D PROTEIN 1779 2047 - -
Lal21g1329 2047 PANTHER BNAA09G28150D PROTEIN 1173 1224 - -
Lal21g1329 2047 PANTHER BNAA09G28150D PROTEIN 225 1071 - -
Lal21g1329 2047 PANTHER BNAA09G28150D PROTEIN 1119 1168 - -
Lal21g1329 2047 PANTHER BNAA09G28150D PROTEIN 1229 1553 - -
Lal21g1329 2047 Coils Coil 1530 1599 - -
Lal21g1329 2047 Coils Coil 847 881 - -
Lal21g1329 2047 Coils Coil 1470 1490 - -
Lal21g1329 2047 Coils Coil 1656 1700 - -
Lal21g1329 2047 Coils Coil 484 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1329 Lal-Chr21 16644245 16658938 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1329 - - ccaj:109802875 2204.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1329 21 16644245 16658938 Lal17g1653 17 17797392 17800265 LSH