Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1312 ATGAAGTTTTTCTCTTTATCTCTATGTCTTCTCCTTTGTCACTGGTTTCAAAGTGTGTCGTCTCAAAATGCATCTAAGAGTAACAACCTACAACAAGCTACTATTCCACCAAGAGGTTGGAATTCCTATGATTCATTTAGTTGGGTAATATCTGAACAAGAATTTTTGCAGAGTGCTGAAATAGTTTCTCAGAAACTCCATGATCACGGATACGAGTATGTTGTGGTGGATTACCTCTGGTATAGAATGAAAGTCCCGGGTGCATCTCATTATTCGATTGGATACGATGTGATTGATGAATGGGGAAGGATGGTTCCAGACCCAGGGAGGTGGCCTTCTTCCAAAGATGGAAAAGGGTTCACTGAAATAGCTGATAAAGTACATAGCTTGGGTTTAAAGTTTGGTATTCATGTTATGAGAGGAATAAGCACACAAGCTGTAAATGCAAACACCCCTATCCTAGATATAACAAAGGGTGGTACTTATGAAGAATCTGGTCGAGTGTGGCGTGCGAAAGATATAGCGATTCCCGAAAGGGCTTGTGCATGGATGCCTGACGGTTTCATGAGCGTAAATACAAACTTGGGAGCTGGGAAAGCTTTTTTGAGATCCCTTTATGTGCAGTATGCTGCATGGGGTGTTGATTTTGTGAAACATGATTGTGTATTTGGCGATGACTTGGATCTAAATGAAATAACCTATGTATCAGAGCTTCTCCGGGAGTTCGATCGCCCAATTTTATATTCTTTGTCTCCCGGAACCAGCGTGACACCGGCTATGGCTAAGGAAGTCAGCGGACTGGTCAACTTGTACCGTATAACAGGAGATGACTGGGATAACTGGGGGGATGTCAAAGCTCATTTTGATGTATCAAGGGATTTTTCAACTGCTAATATGATAGGAGCGAAAGGTTTAAAGGGGAATTCTTGGCCTGATTTGGACATGCTACCATTTGGATGGCTAACCGATCCGGGTTCAAATCAAGGTCCACACAGGAATACTAATCTCAATCTAGTAGAGAAAACGACACAGTTTCCTTATATCACAAGCTTGAAGAGTGAAGATCCTCTTTGGTCGCCGATCAGAAGATCCAATAAAGAAATGAAAACATCATATACGCATTCGTTAAGTTTCACTAGCTGTGCAGAGTCAAAGGCAAGTGGTTGGAGTAGTGATAATATTGGCCAATATGTTGAAAGAGTTTGTTGGAAAAGGAGTTTAGGAAACAAGAATCTTGACCCTTTCTGTGTACACAAGAGAGGAATTCGCTTCACGTTACATCTGGAGAGTATGTTTCAAAAGAATCATCGAGGGGAACATCATTTAGTTTCGACCGATAATGATAAATTTTGCTTGGATGCTTCTCCAAGACGAAAGCTTACTTCTCAAGAGTCCAGGAGAGGGTCATTTTCTCCCTGTAGGTGGGATTCAAATCAGATGTGGCAGCTGAACTCTAATGGGACCCTGGTAAATAGTTATTCTGGCCAATGTGCAACAATTAAGGTTACAAAAGCTACTACTAATGTTGGTGGTTTTCGGTCATGGATTGCAACAGGAAGGAAAGGAGAAGTTTATGTTGCTTTCTTCAATCTAAGTGAACAGGAAAATGTGATATCTGCACAGATATCAGACCTGACTAAGGTTCTTCCTGGCAGAGACTTCAATTCCTGTGAGGCCAATGAAGTGTCGAGTGGAGATGACATATCAACAACGCACGGGACATTATCGGCGACAGTGACAATGCATGGAAGTGCACTATTTGTTCTAAATTGCAACTAG 1779 0.4165 MKFFSLSLCLLLCHWFQSVSSQNASKSNNLQQATIPPRGWNSYDSFSWVISEQEFLQSAEIVSQKLHDHGYEYVVVDYLWYRMKVPGASHYSIGYDVIDEWGRMVPDPGRWPSSKDGKGFTEIADKVHSLGLKFGIHVMRGISTQAVNANTPILDITKGGTYEESGRVWRAKDIAIPERACAWMPDGFMSVNTNLGAGKAFLRSLYVQYAAWGVDFVKHDCVFGDDLDLNEITYVSELLREFDRPILYSLSPGTSVTPAMAKEVSGLVNLYRITGDDWDNWGDVKAHFDVSRDFSTANMIGAKGLKGNSWPDLDMLPFGWLTDPGSNQGPHRNTNLNLVEKTTQFPYITSLKSEDPLWSPIRRSNKEMKTSYTHSLSFTSCAESKASGWSSDNIGQYVERVCWKRSLGNKNLDPFCVHKRGIRFTLHLESMFQKNHRGEHHLVSTDNDKFCLDASPRRKLTSQESRRGSFSPCRWDSNQMWQLNSNGTLVNSYSGQCATIKVTKATTNVGGFRSWIATGRKGEVYVAFFNLSEQENVISAQISDLTKVLPGRDFNSCEANEVSSGDDISTTHGTLSATVTMHGSALFVLNCN 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1312 592 SUPERFAMILY Glycosyl hydrolase domain 509 590 - -
Lal21g1312 592 SUPERFAMILY (Trans)glycosidases 33 347 IPR017853 -
Lal21g1312 592 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 4 345 IPR002241 GO:0004553|GO:0005975
Lal21g1312 592 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 362 589 IPR002241 GO:0004553|GO:0005975
Lal21g1312 592 Pfam Alpha galactosidase C-terminal beta sandwich domain 512 589 IPR041233 -
Lal21g1312 592 SUPERFAMILY Ricin B-like lectins 441 503 IPR035992 -
Lal21g1312 592 Gene3D Aldolase class I 26 357 IPR013785 -
Lal21g1312 592 Pfam Alpha galactosidase A 49 144 IPR002241 GO:0004553|GO:0005975
Lal21g1312 592 Gene3D - 503 591 IPR013780 -
Lal21g1312 592 CDD GH27 36 321 IPR002241 GO:0004553|GO:0005975
Lal21g1312 592 PANTHER ALPHA-GALACTOSIDASE 362 589 - -
Lal21g1312 592 PANTHER ALPHA-GALACTOSIDASE 4 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1312 Lal-Chr21 16433071 16439338 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g1312 18 420 Glycoside Hydrolase AT3G26380 58.222 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1312 - - gmx:100777954 928.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1295 14 14607268 14613526 Lal21g1312 21 16433071 16439338 PCT