Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1295 ATGAAGTGTTTCTCAGTGCCCTTCGTCTCTCTCTTGCTTCTCCTTGCTCTCTGTGTTCACAGTGTTTCATCTCAGAATATATCTCTGAGTGCCCTGCAGCAAGCTAGCTTCCCACCAAGAGGTTGGAATTCGTATGATTCCTTTTGCTGGACAATTTCTGAAGAAGAATTCTTAGAGAATGCTGAACTAGTTTCTCAGCGTCTCCGTGTTCATGGATACAAGTATGTTGTGGTGGATTACCTCTGGTATAGAAAGAAAGTCAAGGGTGCTTATCCTGATTCTCTAGGATTCGATGTGATTGATGAATGGGGAAGGATGGTCCCTGATCCAGGGAGGTGGCCTTCTTCCGCAGGTGGGAAGGGGTTCACTGAGGTAGCTAATAAAGTACATAGAATGGGTTTAAAGTTTGGGATTCATGTTATGAGAGGGATAAGCACACAAGCCGTCAATGCAAACACTGCTATCCTAGATATAACAAAGGGAGGTGCTTATCAAGAATCTGGTCGAGTGTGGCATGCAAAAGACATAGCAATTCCGGAAAGGGCTTGTGCATGGATGCCTAATGGTTTCATGAGTGTAAACACAAAGTTGGGAGCTGGAAAAGCTTTTTTGCGGTCCCTTTATGAGCAGTATGCTGAGTGGGGCGTTGATTTTGTGAAACATGACTGTGTATTTGGCGATGACTTGGATTTAAATGAAATAACATATGTATCAGAGGTTCTCAGGAATCACCCCATTGTGTATTCTCTGTCTCCCGGAACGAGTGTCACACCAGCCATGGCCAAGGATGTTAGTTCACTAGTCAACATGTATCGTATAACAGGAGATGACTGGGATACTTGGGATGATGTCAAAGCTCATTTTGGTGTAACAAGGGATTTTGCTACTTCTAATATGATAGGAGGTAAAGGTTTAAAAGGATTCTCGTGGCCTGATTTAGACATGCTACCATTTGGATGGCTAACTGATCCAGGGTCAAATGAAGGTCCGTACAGATATAGTAAACTCAATCTTGAAGAGAAACGGACACAGATGACCCTATGGTCTATGGCAAAGTCTCCCCTTATGTATGGAGGGGATGTGCGAAAAATCGATCCTACTACATTTGATCTCATCACGAATCCTACCCTCCTCGAGATTAATTATTTCAGCTCAAATAATATGGAGGCATGTCTCACTGGTTGCACGGAATCAAAGGCAAGTGGTTGGTCTATTGAAAGTCTTAACCATGATCTTGAAAGAATCTGTTGGAAAAGGAAGCTAGAAAAAATGCATCAGGCACCATTCTGCGTACACAAGAGAGAAATTCGATTCAGATTAGACGGAGAGAGTATGTATCAAGAGGAGCATCAAGGGAAGCATCATTTAGTTGATTCCGATAGAATGAAACTTTGCTTGGATGCTTCTCCGAAAAGAAAGCTTACTTCTAAAGAGTTCAAGAGAGGTACATTTTCTCCTTGCAGATGGGATGAAAATCAGATGTGGGAGCTAAACCCCAACGGGACCCTGGTAAATAGTTATTCCGGCCTGTGTGCAACAGTAAAGTCAGTAAAAGCTGATGTAAATTCTGGCGGGATCAGTTCTTGGATTGCAATGGGGAGAAAAGGAGAAGTTTATGTTGCTTTCTTCAATTTAAGTGAACAGAAGAAAGTGATATATGCAAAGATATCAAATCTTTCTAAGGTTCTTCCTGGAAGAAGCTTCAATTCTTGTAAGGGCAAGGAAATATGGAGTGGAAAAGACATAGTAACAACGGATCAGACATTATCGATAGAAGTGGAAATTCATGGATGTGCACTATTTGTTCTGCAATGCTATTAG 1821 0.4195 MKCFSVPFVSLLLLLALCVHSVSSQNISLSALQQASFPPRGWNSYDSFCWTISEEEFLENAELVSQRLRVHGYKYVVVDYLWYRKKVKGAYPDSLGFDVIDEWGRMVPDPGRWPSSAGGKGFTEVANKVHRMGLKFGIHVMRGISTQAVNANTAILDITKGGAYQESGRVWHAKDIAIPERACAWMPNGFMSVNTKLGAGKAFLRSLYEQYAEWGVDFVKHDCVFGDDLDLNEITYVSEVLRNHPIVYSLSPGTSVTPAMAKDVSSLVNMYRITGDDWDTWDDVKAHFGVTRDFATSNMIGGKGLKGFSWPDLDMLPFGWLTDPGSNEGPYRYSKLNLEEKRTQMTLWSMAKSPLMYGGDVRKIDPTTFDLITNPTLLEINYFSSNNMEACLTGCTESKASGWSIESLNHDLERICWKRKLEKMHQAPFCVHKREIRFRLDGESMYQEEHQGKHHLVDSDRMKLCLDASPKRKLTSKEFKRGTFSPCRWDENQMWELNPNGTLVNSYSGLCATVKSVKADVNSGGISSWIAMGRKGEVYVAFFNLSEQKKVIYAKISNLSKVLPGRSFNSCKGKEIWSGKDIVTTDQTLSIEVEIHGCALFVLQCY 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1295 606 Pfam Alpha galactosidase C-terminal beta sandwich domain 524 603 IPR041233 -
Lal14g1295 606 PRINTS Glycosyl hydrolase family 27 signature 32 51 IPR002241 GO:0004553|GO:0005975
Lal14g1295 606 PRINTS Glycosyl hydrolase family 27 signature 67 82 IPR002241 GO:0004553|GO:0005975
Lal14g1295 606 PRINTS Glycosyl hydrolase family 27 signature 339 360 IPR002241 GO:0004553|GO:0005975
Lal14g1295 606 Pfam Alpha galactosidase A 208 381 IPR002241 GO:0004553|GO:0005975
Lal14g1295 606 Gene3D - 518 605 IPR013780 -
Lal14g1295 606 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 3 603 IPR002241 GO:0004553|GO:0005975
Lal14g1295 606 SUPERFAMILY Glycosyl hydrolase domain 522 604 - -
Lal14g1295 606 PANTHER ALPHA-GALACTOSIDASE 3 603 - -
Lal14g1295 606 Gene3D Aldolase class I 30 384 IPR013785 -
Lal14g1295 606 CDD GH27 38 381 IPR002241 GO:0004553|GO:0005975
Lal14g1295 606 CDD RICIN 453 529 IPR000772 -
Lal14g1295 606 SUPERFAMILY Ricin B-like lectins 462 523 IPR035992 -
Lal14g1295 606 SUPERFAMILY (Trans)glycosidases 35 381 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1295 Lal-Chr14 14607268 14613526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1295 11 435 Glycoside Hydrolase AT3G26380 64.847 0.0 614
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1295 - - lang:109362678 1146.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1295 14 14607268 14613526 Lal21g1312 21 16433071 16439338 PCT