Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1289 ATGGGTTTGTCTCATAAGTTTCCTTCATTTAGCTTTGAACTTCGAATAATAGAAGCACAAAACATTGAGTCCATCAAGTCAATGGGAAATTCATTATTTGCAAGGTTCTATCTTCCTATAGGAAATAACAAAAGAATTCAACTCAACACTAAAAAGGTTTCTTCCAAAGCTACAATACCCTTTTGGAATGAGTCCTTTGGTCTAGAATGTTCATGTCCCCAAGAATTCTTGGAGACTCTTAAGCATGAAAGTATGGTGTTGGAGCTAAGGCAAAGCAAAAAGAGGATTTGGGGGTCACATCTTATGGGTAAGGGTGAGATTCCATGGATGAAAATTCTCGAGTCACCAAATATGATGTTTAAAGAATGGGTGAAGATGGATTTGGAAAGTGTAAGTAATTGTGAAGAGGACATGCTCAAGGTAGCTGAAGTGCAAGTGGAGATAAAAATAAGAGTGACTTCAATGGAAAAAGAAGAAAGTAGTGTAAATAATTGGGACATTAAACTCGATAAAAGAGCTAGACTTCAAAGTTATCAGATTGCCTCCAATCTTGAAAGAAAGGAAATCTAA 570 0.3614 MGLSHKFPSFSFELRIIEAQNIESIKSMGNSLFARFYLPIGNNKRIQLNTKKVSSKATIPFWNESFGLECSCPQEFLETLKHESMVLELRQSKKRIWGSHLMGKGEIPWMKILESPNMMFKEWVKMDLESVSNCEEDMLKVAEVQVEIKIRVTSMEKEESSVNNWDIKLDKRARLQSYQIASNLERKEI 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1289 189 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 13 153 IPR035892 -
Lal21g1289 189 PANTHER OSJNBA0006M15.15 PROTEIN 1 166 - -
Lal21g1289 189 PANTHER OSJNBA0006M15.15 PROTEIN 1 166 - -
Lal21g1289 189 CDD C2 12 125 - -
Lal21g1289 189 Gene3D C2 domain 3 158 IPR035892 -
Lal21g1289 189 Pfam C2 domain 12 115 IPR000008 -
Lal21g1289 189 ProSiteProfiles C2 domain profile. 1 124 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1289 Lal-Chr21 16217285 16218478 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1289 - - gmx:100807677 214.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1289 21 16217285 16218478 Lal17g1626 17 17626941 17627516 LSH