Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1626 ATGGATTTGTCTCATAATTTTCCTTCCTTATGCTTTGAGCTTAGAATAATACAAGCCAAAAACAATGAGCATATCAAATCTTCTGGAAACTCATTATTTGCCAGGTTTTATCTACCAACAGGAAACAACAAAATTCAACTCAATACCAAAAAGGTTTCCTCCAAATCTATAAATCCCTTTTGGAATGAGTCCTTTAATCTAGAATGTTCTTGTCCTCAAGAATTCTTGGAAACCCTAGAGCAGGAAAGCATGGTGTTGGAGCTAAGGCAAAGAAAAAATAGGATTTGGGGGTCAAATCTTATAGGAAGGGGTGAGATTCCATGGAAGAAAATTCTTGATTCATCAAATATGATGCTTAAAGAATGGGTGAAGATGGATTTGGTGAATGGAAATGATGATGATATACTCAAGGTACCTGAAGTGCAAGTAGAGATAAAAATTAGGGTTAGGTCGATGGAAAAAGAGGAGAATAGTTTAAATAAGTGTGGGTTCAAACATGATCATGATCTTCACCCTTGGTTAAGTGCTGAAGATTATGACATTTTTACACTTGGGGCTGCATTGGAAGCATTTTGA 576 0.3594 MDLSHNFPSLCFELRIIQAKNNEHIKSSGNSLFARFYLPTGNNKIQLNTKKVSSKSINPFWNESFNLECSCPQEFLETLEQESMVLELRQRKNRIWGSNLIGRGEIPWKKILDSSNMMLKEWVKMDLVNGNDDDILKVPEVQVEIKIRVRSMEKEENSLNKCGFKHDHDLHPWLSAEDYDIFTLGAALEAF 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1626 191 PANTHER OSJNBA0006M15.15 PROTEIN 1 191 - -
Lal17g1626 191 ProSiteProfiles C2 domain profile. 1 123 IPR000008 -
Lal17g1626 191 Gene3D C2 domain 2 156 IPR035892 -
Lal17g1626 191 PANTHER OSJNBA0006M15.15 PROTEIN 1 191 - -
Lal17g1626 191 SMART C2_3c 11 120 IPR000008 -
Lal17g1626 191 CDD C2 12 124 - -
Lal17g1626 191 Pfam C2 domain 12 117 IPR000008 -
Lal17g1626 191 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 130 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1626 Lal-Chr17 17626941 17627516 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1626 - - gmx:100807677 231.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1289 21 16217285 16218478 Lal17g1626 17 17626941 17627516 LSH