Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1262 ATGGCAATTTCAATTGAAACCCTTTTCAAAGAGAGAAAATTTCCTTTCATTTTCACCTTCTTGATCTTGCTCTTTTGTGTAATGATCCTTCTCTATGCCAACAACAACAACACCATTACAATTTCAACCTCTTCCACCCTTGACACAATTGGTTTCTACCCTGATGTTAAAGTGCAAGAACAACAACAACCCCTTAACCCTTCTCCCTTTGTGCTTCAAGATTCTTCTTCTTCCACCAAAAGTCCTAAAGAGAAAGAACAAGAGCTTCTTCAGAAGAACAAAGGGTTGCTCAAGAAGGTGGAAGGTTTTGGTAATGTTGATGTGAAAATTGATTGGAAGCTTTGTAAGGGAGTGGTAGCAGTTGATTACATACCTTGTTTAGATAATTTGAAAGCAATTAAGGCCTTGCGGTCGAGAAGGCATATGGAGCATAGGGAAAGGCATTGTCCTGATTCTCGATCGCGATGTTTGCTGCCGCTTCCGAAAGGTTATAAAGTTCCCGTTCTGTGGCCTAAGAGCAGGGACATGATTTGGTATGATAATGTCCCTCATCCGAAGCTTGTTGAGTACAAAAAGGAACAAAATTGGGTGGTGAAATCCGGCGAATATCTTGTTTTTCCCGGAGGTGGTACTCAATTCAAAGAAGGAGTTACCCATTATATTAATTTCATTGAGGAGACACTACCAACAATTCAGTGGGGAAAAAATATCAGAGTTGTTCTTGATGCTGGTTGTGGTGTTGCTAGCTTTGGCGGCTATCTTCTTGACAAAAATGTTATTACAATGTCATTTGCACCGAAAGATGAACACGAAGCACAGATACAGTTCGCTTTGGAGCGAGGAATTCCTTCGACTCTTTCTGTTATTGGAACACAAAAGTTGACATTTCCTGACAACGGATTTGATTTGATCCATTGTGCACGTTGCAGAGTTCATTGGGACGCAGACGGTGGGAAACCATTATTTGAGCTCAATCGGATTCTTAGACCTGGCGGTTTCTTTGTATGGTCTGCAACACCTGTTTATCGTGATGACGAAAGAGATCAGAAAGTATGGAATGCCATGGTGACTGTAACAAAAGCAATGTGCTGGAATGTTGTGGCTAAGACCGTTGATTCATCTGGAATCGGTCTTGTCATATACCAGAAGCCTACTTCAATTTCTTGCTATGAGAAACGCAAGGAGAATAATCCTCCATTATGCACATATAATGATAGAAAAAATAGCTCATGGTATGCCAGACTTAGTAGCTGCCTTATTCCTCTTCCAGTTGATGGTATGTTGAACATTCAGAGCTGGCCGATGCCATGGCCTCAGAGACTAACCAGTAAACCTCCTAGCTTATCTACTGAATCCAATGCGGCCGAGATGTTCTACAAGGACAGCGAACACTGGTCTCAACTAGTTTCAGAAGTTTATGTGGATGGTCTTTCTATAAATTTGTCTAATGTTCGAAATGTTATGGACATGAATGCCGGTTATGCAGGTCTTTTCGATTGTGATGGTAAAACTGCGTACATCAATTATCTTCAGATTCCCATTAGGCCTAGTGAGCCTTATGCACCAAACCGCCCTTTTTATCCTTTGTTTTGTGTGGCTTTCACTTTTTCGGGTCTTGACACCAAGTATGGTATTTTCAGATTTGCCGCGGCACTCATCGATCTACCTGTGTGGGTGATGAATGTGGTACCTATTGATATGCCAGATACTCTTACCACTATATTTGACAGAGGCTTAATAGGAATGTATCATGATTGGTGCGAGTCCCTTAATACATACCCTCGCACATACGATCTTGTTCATTCGAACTTTCTCTTCAAAAATCTCGAGGAAAGATGTGACATCATAGATGTGATTGTTGAGATAGATCGCGTTGTGAGACCGGACGGGTATGTCGTTGTTCAGGACTCTATGGAAGTAATGAACAAGATTGGACCAATCTTGCATTCACTACATTGGTCTGTAACATTGTATCAAAATCAATTCCTTGTTGGTAGGAAGAGTTTTTGGCGTCCAAGACCATAG 2025 0.4128 MAISIETLFKERKFPFIFTFLILLFCVMILLYANNNNTITISTSSTLDTIGFYPDVKVQEQQQPLNPSPFVLQDSSSSTKSPKEKEQELLQKNKGLLKKVEGFGNVDVKIDWKLCKGVVAVDYIPCLDNLKAIKALRSRRHMEHRERHCPDSRSRCLLPLPKGYKVPVLWPKSRDMIWYDNVPHPKLVEYKKEQNWVVKSGEYLVFPGGGTQFKEGVTHYINFIEETLPTIQWGKNIRVVLDAGCGVASFGGYLLDKNVITMSFAPKDEHEAQIQFALERGIPSTLSVIGTQKLTFPDNGFDLIHCARCRVHWDADGGKPLFELNRILRPGGFFVWSATPVYRDDERDQKVWNAMVTVTKAMCWNVVAKTVDSSGIGLVIYQKPTSISCYEKRKENNPPLCTYNDRKNSSWYARLSSCLIPLPVDGMLNIQSWPMPWPQRLTSKPPSLSTESNAAEMFYKDSEHWSQLVSEVYVDGLSINLSNVRNVMDMNAGYAGLFDCDGKTAYINYLQIPIRPSEPYAPNRPFYPLFCVAFTFSGLDTKYGIFRFAAALIDLPVWVMNVVPIDMPDTLTTIFDRGLIGMYHDWCESLNTYPRTYDLVHSNFLFKNLEERCDIIDVIVEIDRVVRPDGYVVVQDSMEVMNKIGPILHSLHWSVTLYQNQFLVGRKSFWRPRP 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1262 674 Gene3D Vaccinia Virus protein VP39 214 406 IPR029063 -
Lal21g1262 674 MobiDBLite consensus disorder prediction 66 87 - -
Lal21g1262 674 PANTHER PMT16, PUTATIVE-RELATED 4 497 - -
Lal21g1262 674 PANTHER PMT16, PUTATIVE-RELATED 539 673 - -
Lal21g1262 674 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 540 661 IPR004159 GO:0008168
Lal21g1262 674 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 122 496 IPR004159 GO:0008168
Lal21g1262 674 CDD AdoMet_MTases 240 335 - -
Lal21g1262 674 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 548 644 IPR029063 -
Lal21g1262 674 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 146 355 IPR029063 -
Lal21g1262 674 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 539 673 IPR004159 GO:0008168
Lal21g1262 674 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 4 497 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1262 Lal-Chr21 15853506 15858166 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1262 - - gmx:100808221 966.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1262 21 15853506 15858166 Lal18g1390 18 16180543 16184684 LSH
Lal21g1262 21 15853506 15858166 Lal18g1390 18 16180543 16184684 PCT
Lal18g1390 18 16180543 16184684 Lal21g1262 21 15853506 15858166 PCT