Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1212 ATGGCGGAAAAACCCCAACCAATTCGTGTAATCTATTGCCCCATTTGTTCCTTACCACCCGAATACTGCGAATTCGGATCCGATTTCGATAGATGCAAACCCTGGTTGATCCAAAACGTTCCTCATCTTTACCCCGATCTTCTTAAAGAGGCAAATGAAAAGGACACTGATAACATTGCTGACAAGTTACAGAGTACGGGTATCTCTTCGGGTACTAGTGCTGCTACCTCAGCGTCAAAGCAAGAAGTGGTTAAACGTCTTCCTGGAGGGAAGATAAAGAAAAAGGCACGTCTTGATAGGCAAGAGGTTGTTATTGAGAAGGTCATACGTAATAAAAGAAAGTGTATCACCACTGTGAAAGGCTTGGAACTTTTCGGTATCAAGCTCAGTGATGCTTCAAAGAAACTCGGGAAAAAGTTCGCTACAGGAGCTTCTGTTGTCAAGGGCCCAACTGAGAAAGATCAAATCGATGTTCAAGGGGATATAGCTTATGACATTGTGGAGTTTATTACAGATACATGGCCTGATGTTCCTGAAGCAGCAATTTTCTTTATAGAAGATGGGAGAAAAGTTCCAGCTGCTTGA 585 0.4274 MAEKPQPIRVIYCPICSLPPEYCEFGSDFDRCKPWLIQNVPHLYPDLLKEANEKDTDNIADKLQSTGISSGTSAATSASKQEVVKRLPGGKIKKKARLDRQEVVIEKVIRNKRKCITTVKGLELFGIKLSDASKKLGKKFATGASVVKGPTEKDQIDVQGDIAYDIVEFITDTWPDVPEAAIFFIEDGRKVPAA 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1212 194 PANTHER DENSITY-REGULATED PROTEIN HOMOLOG 1 194 - -
Lal21g1212 194 SUPERFAMILY eIF1-like 19 184 IPR036877 GO:0003743|GO:0006413
Lal21g1212 194 TIGRFAM DRP1: density-regulated protein DRP1 7 182 IPR005873 GO:0003743
Lal21g1212 194 Gene3D - 46 179 - -
Lal21g1212 194 CDD DENR_C 101 186 IPR046447 -
Lal21g1212 194 Pfam Translation initiation factor SUI1 101 173 IPR001950 GO:0003743|GO:0006413
Lal21g1212 194 ProSiteProfiles Translation initiation factor SUI1 family profile. 103 174 IPR001950 GO:0003743|GO:0006413
Lal21g1212 194 PANTHER TRANSLATION MACHINERY-ASSOCIATED PROTEIN 22 1 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1212 Lal-Chr21 15088756 15093410 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1212 K24272 - gmx:100306708 334.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1212 21 15088756 15093410 Lal21g1212 21 15088756 15093410 ECH
Lal17g1537 17 16762570 16765812 Lal21g1212 21 15088756 15093410 LSH