Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1537 ATGGCGGAAAAACCTCAACCAGTTCGTGTACTCTATTGCCCCATTTGTTCATTACCACCCGAATACTGTGAATTCGGATCCGATTTTGATAAATGCAAACCCTGGTTGATCCAAAACGTTCCTGAACTTTACCCTAATCTTCTTAAAGAGGCAAATGAGAGAGGTGTTGATAATGTTGCTGACAAGTTACAAAACACTGGTATTTCTTCTGGTGTTAGTGGTTCAGCTGCTACATCAGCTTCGAAGCAAGAAGGGGTCAAACGTCTTCCCGGAGGGAAGATGAAGAAAAAGGCATGTCTTGAGAGGCAAGAAGTTGTCATCGAGAAAGTCATACGTAACAAACGAAAATGTATCACTACTGTGAAAGGCCTAGAGCTTTTTGGTATCAAGCTCAGCGATGCTTCAAAAAAACTCGGGAAAAAGTTTGCTACAGGAGCCTCTATTGTCAAGGGCCCAACTGAGAAAGATCAAATTGATGTTCAAGGAGATATAGCTTATGACATTGTGGAGTTCATTACAGATACATGGCCTGATGTTCCTGAAACAGCAATTTTCTTTATAGAAGATGGGAAAAAGGTTCCAGCTGCATGA 591 0.4146 MAEKPQPVRVLYCPICSLPPEYCEFGSDFDKCKPWLIQNVPELYPNLLKEANERGVDNVADKLQNTGISSGVSGSAATSASKQEGVKRLPGGKMKKKACLERQEVVIEKVIRNKRKCITTVKGLELFGIKLSDASKKLGKKFATGASIVKGPTEKDQIDVQGDIAYDIVEFITDTWPDVPETAIFFIEDGKKVPAA 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1537 196 PANTHER TRANSLATION MACHINERY-ASSOCIATED PROTEIN 22 1 196 - -
Lal17g1537 196 Gene3D - 60 182 - -
Lal17g1537 196 Pfam Translation initiation factor SUI1 103 175 IPR001950 GO:0003743|GO:0006413
Lal17g1537 196 TIGRFAM DRP1: density-regulated protein DRP1 7 184 IPR005873 GO:0003743
Lal17g1537 196 SUPERFAMILY eIF1-like 19 186 IPR036877 GO:0003743|GO:0006413
Lal17g1537 196 ProSiteProfiles Translation initiation factor SUI1 family profile. 105 176 IPR001950 GO:0003743|GO:0006413
Lal17g1537 196 PANTHER DENSITY-REGULATED PROTEIN HOMOLOG 1 196 - -
Lal17g1537 196 CDD DENR_C 103 188 IPR046447 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1537 Lal-Chr17 16762570 16765812 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1537 K24272 - gmx:100306708 329.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1537 17 16762570 16765812 Lal17g1537 17 16762570 16765812 ECH
Lal17g1537 17 16762570 16765812 Lal21g1212 21 15088756 15093410 LSH