Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1194 ATGGGTGATAATAGTTCCCTTCAATCTGGGTCACCTTCAAAACCTAACCCAGATCTTGTTGAAGAAGAATCAGATTCAGTGATTCAAAAGGGTCATAACAATAACAATAATAATGATACCTCATTGGATACTATTGTACAAAGGTTCCAAGATTCAATGTCTATTGATGATAATAATAATAATAATAAGAGACATAAGTTTTGGGAAACTCAGCCTGTTGGTCAGTACAAGGATGTTGGAGATTTTACCTTAATCGAAGGCCCGATCGAGCCTCCGGCGCCGTTGTCCGAGGTCAAGCAGGAACCTTACAATCTTCCAGCTGCTTATGAATGGACCACTTGTGACATGGACTCTCAAGAAACTTGTGATGAGGTTTATCTTCTATTGATGAACAATTATGTTGAAGATGATGAGAACATGTTCAGGTTCAACTATTCCGAGGAATTTCTAAGGTGGGCCCTGCGTGTTCCCGGTTATTACAGGAGTTGGCATATTGGTGTTCGTGCTAAGGCTTCGAAGAAGTTGGTTGCTTTCATCACCGCGGTTCCTGCCAGAATCAGGGTTAACGACGAGGTTGTGAAAATGGCAGAGGTTAATTTCTTATGTGTCCATAAGAAGCTTAGGTCCAAGAGACTCGCGCCTGTTTTGATCAAGGAAGTCACTAGGAGGGTTCATTTGGAGAATATTTGGCAGGCTGCGTATACAGCTGGAGTTGTTATTCCAACGCCGATAACAACTTGTCAGTATTGGCATAGATCGTTGAATCCAAAGAAGCTTATTGACGTGGGGTTTTCAAGGCTAGGTGCTAGGATGACAATGAGCCGCACTATAAAACTTTACAAGTTACCTGATTCAACAGTTACTCCTGGATTCAGAAAAATGGAGCTCCGCGATGTCCCTGCTGTTACTCGGTTACTTAGGAATTACTTGGGCCAGTTCCTTGTTGCTCCCGATTTCGATGAACATGATATTGAGCATTGGCTTATTCCTCGCGACAATGTGGTGGATAGTTACTTGGTTGAGAGTCCTGAAAATCATGACATCACAGACTTCTGCAGCTTCTACACTCTTCCTTCTTCCATCCTTGGAAATCAAGCTCACTCAACTCTAAAAGCAGCTTATTCTTATTATAACGTCTCCACCAAAACTCCGATGCCTCAGTTGATGAATGACGCGCTTATTGTAGCAAAGCAAAAAGATTTCGATGTTTTCAATGCCTTGGATATAATGCATAATGAGAGTTTTCTCAAAGACCTCAAGTTTGGGCCAGGAGATGGACAGCTTCACTACTACTTGTACAATTATAGGGTTCGTAATGAACCACCT 1326 0.4201 MGDNSSLQSGSPSKPNPDLVEEESDSVIQKGHNNNNNNDTSLDTIVQRFQDSMSIDDNNNNNKRHKFWETQPVGQYKDVGDFTLIEGPIEPPAPLSEVKQEPYNLPAAYEWTTCDMDSQETCDEVYLLLMNNYVEDDENMFRFNYSEEFLRWALRVPGYYRSWHIGVRAKASKKLVAFITAVPARIRVNDEVVKMAEVNFLCVHKKLRSKRLAPVLIKEVTRRVHLENIWQAAYTAGVVIPTPITTCQYWHRSLNPKKLIDVGFSRLGARMTMSRTIKLYKLPDSTVTPGFRKMELRDVPAVTRLLRNYLGQFLVAPDFDEHDIEHWLIPRDNVVDSYLVESPENHDITDFCSFYTLPSSILGNQAHSTLKAAYSYYNVSTKTPMPQLMNDALIVAKQKDFDVFNALDIMHNESFLKDLKFGPGDGQLHYYLYNYRVRNEPP 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1194 442 PIRSF N-myristl_transf 16 442 IPR000903 GO:0004379|GO:0006499
Lal21g1194 442 PANTHER GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE 29 439 - -
Lal21g1194 442 Pfam Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain 261 438 IPR022677 GO:0004379
Lal21g1194 442 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 63 248 IPR016181 -
Lal21g1194 442 Pfam Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain 88 247 IPR022676 GO:0004379
Lal21g1194 442 Gene3D - 55 442 - -
Lal21g1194 442 MobiDBLite consensus disorder prediction 1 15 - -
Lal21g1194 442 ProSitePatterns Myristoyl-CoA:protein N-myristoyltransferase signature 1. 197 205 IPR022678 GO:0004379
Lal21g1194 442 MobiDBLite consensus disorder prediction 1 42 - -
Lal21g1194 442 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 249 439 IPR016181 -
Lal21g1194 442 ProSitePatterns Myristoyl-CoA:protein N-myristoyltransferase signature 2. 420 426 IPR022678 GO:0004379
Lal21g1194 442 PANTHER N-MYRISTOYL TRANSFERASE 29 439 IPR000903 GO:0004379|GO:0006499
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1194 Lal-Chr21 14756052 14762161 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g1194 17 439 Acyl Lipid Metabolism Gene Families AT5G57020 79.669 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1194 K00671 - gmx:100787291 739.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1194 21 14756052 14762161 Lal21g1194 21 14756052 14762161 ECH
Lal17g1517 17 16545447 16548375 Lal21g1194 21 14756052 14762161 LSH