Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1517 GGAGGGAGAAAGATAGAAACAATTTCAAATCCACCATTCCTTACTTCAAATCTCGATCTGATTCATTCTCTTATACCCACTTCTCCTTCTCCATCATCTCAATCTGTTGAATTTTTATCAATTGAAATGGATGATAACACTTCCCTTCCATCTGGGTCTTCTCCAAAACCAAACCCAGATCATATTGAAGTGGATTCAGATTCAGTGGTTTCAAAGGGTCATAATAACAATAGTGATAACTCATTGGACACTATTGTACAAAGGTTCCAAGATTCAATGTCTCTTGATGATGATAATAATAATATTAAGAGACATAAGTTCTGGGAAACTCAACCTGTTGGTCAATACAAGGATGTTGGAGACTTTAGTTTAGCCGATGGCCCGATCGAGCTTCCAACACCGTTGTCTGATGTCAAGCAGGAACCTTACAATCTTCCAACTGCTTATGAATGGACCACTTGTGACATGGACTCTCAAGAAACATGTGATGAGGTTTATCTTCTCTTGATGAATAATTATGTTGAGGATGATGAGAACATGTTCAGGTTCAACTATTCGAAGGAATTTCTAAGGTGGGCGCTCCGTGTTCCTGGTTATTACAGGAGTTGGCATATTGGTGTTCGTGCTAAGACTTCCAAGAAGTTGGTTGCTTTCATCACTGGGGTGCCTGCGAGAATAAGGGTTAATGATAAGGTTGTGAAAATGGCTGAGGTTAATTTCTTATGTGTGCATAAGAAGCTTAGATCGAAGAGGCTCGCTCCTGTTTTGATCAAGGAAGTCACTAGGAGGGTTCATTTGGAGAATATTTGGCAGGCAGCTTATACAGCTGGAGTTGTTATTCCAACGCCGATAACAACTTGTCAGTATTGGCATAGATCATTGAATCCGAAGAAGCTTATTGACGTTGGGTTTTCAAGGCTAGGTGCTAGGATGACAATGAGCCGCACTATAAAACTTTACAAGTTACCCGATTCAACAGTTACTCCCGGATTCAGAAAAATGGAGCTCCGGGATGTCCCTGCTGTTACTCGGTTGCTCAGGAACTACTTGAGTCAGTTTATTGTTGCTCCTGATTTTCATGAAGATGATGTTGAGCATTGGCTTGTTCCCCGTGACAATGTGGTGGATAGCTACTTGGTTGAGAGTCCTAAAAATCATGAGATCACAGACTTCTGCAGCTTCTACACTCTTCCTTCTTCTATACTCGGAAATCAAACTCACTCAACTTTGAAAGCTGCATATTCTTATTATAATGTCTCCACTAAAACTCCATTGGCTCAGTTGATGAATGATGCGCTTATTGTAGCAAAACAAAAAGAATTTGATGTTTTCAATGCCTTGGATATAATGCATAATGAGAGTTTCCTCAAAGACCTCAAGTTTGGGCCAGGAGATGGACAGCTTCATTATTACTTGTACAATTATAGGGTTCGTAGTGGTATGAAACCATCTGAACTTGGGCTTATTACTTTTGCAGGGTATGTGAGAGCTTATCCTTTGGGGTTCGTTTGCGAGTTGGGTTTTGGAGGGGGAGGGATGGAAAGGGAAGGCGTTAGAGCCATTTTACAAGTGTATTTCATGGCTCTGAAACCTTCCCTTTCTCTTCCGTCCCCTTCAAAACTTAACTCGCTAATAAACCCATGGGAGACTTCAGCTATAGTTGGTAAACCTCCCTGGAAATACCCTCATGTCCGCTATGTTAAGAAAAGACTGCAGAAACGATATCAGGAGCTCCACGATGACGAGGCCTTTGTTAATTGTGCCAAAAAACTAGCAACAGGAACCTGTGGTAATGGAGTTAGCCAAATGGGTGAAAGTGGA 1821 0.413 GGRKIETISNPPFLTSNLDLIHSLIPTSPSPSSQSVEFLSIEMDDNTSLPSGSSPKPNPDHIEVDSDSVVSKGHNNNSDNSLDTIVQRFQDSMSLDDDNNNIKRHKFWETQPVGQYKDVGDFSLADGPIELPTPLSDVKQEPYNLPTAYEWTTCDMDSQETCDEVYLLLMNNYVEDDENMFRFNYSKEFLRWALRVPGYYRSWHIGVRAKTSKKLVAFITGVPARIRVNDKVVKMAEVNFLCVHKKLRSKRLAPVLIKEVTRRVHLENIWQAAYTAGVVIPTPITTCQYWHRSLNPKKLIDVGFSRLGARMTMSRTIKLYKLPDSTVTPGFRKMELRDVPAVTRLLRNYLSQFIVAPDFHEDDVEHWLVPRDNVVDSYLVESPKNHEITDFCSFYTLPSSILGNQTHSTLKAAYSYYNVSTKTPLAQLMNDALIVAKQKEFDVFNALDIMHNESFLKDLKFGPGDGQLHYYLYNYRVRSGMKPSELGLITFAGYVRAYPLGFVCELGFGGGGMEREGVRAILQVYFMALKPSLSLPSPSKLNSLINPWETSAIVGKPPWKYPHVRYVKKRLQKRYQELHDDEAFVNCAKKLATGTCGNGVSQMGESG 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1517 607 MobiDBLite consensus disorder prediction 44 81 - -
Lal17g1517 607 Pfam Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain 301 485 IPR022677 GO:0004379
Lal17g1517 607 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 102 288 IPR016181 -
Lal17g1517 607 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 289 478 IPR016181 -
Lal17g1517 607 Pfam Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain 128 287 IPR022676 GO:0004379
Lal17g1517 607 PANTHER GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE 71 489 - -
Lal17g1517 607 ProSitePatterns Myristoyl-CoA:protein N-myristoyltransferase signature 1. 237 245 IPR022678 GO:0004379
Lal17g1517 607 PANTHER N-MYRISTOYL TRANSFERASE 71 489 IPR000903 GO:0004379|GO:0006499
Lal17g1517 607 Gene3D - 95 490 - -
Lal17g1517 607 ProSitePatterns Myristoyl-CoA:protein N-myristoyltransferase signature 2. 460 466 IPR022678 GO:0004379
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1517 Lal-Chr17 16545447 16548375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1517 59 489 Acyl Lipid Metabolism Gene Families AT5G57020 79.350 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1517 K00671 - gmx:100789104 761.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1517 17 16545447 16548375 Lal17g1517 17 16545447 16548375 ECH
Lal17g1517 17 16545447 16548375 Lal21g1194 21 14756052 14762161 LSH