Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1152 ATGGCAACATCTTTGATGAACACTCTTCCTCAATTCAATGGCCTTAGACCCCATTCCACACCAACACGGGTTGCTGTACAACCCATGAGGCGCAGAGGGAAGGGTGCTTTGGGAGTTCGCTGTGACTTCATTGGTTCTCAAACTAATCTGATTGTAGTGGCTTCTACAACCCTGATGCTATTTGCTGGAAGGTTTGGATTGGCTCCATCAGCAAACAGAAAAGCAAGTGCAGGGCTAAGGCTGGAAGTGAGGGACTCAGGGTTGCAGACAGGTGACCCAGCTGGGTTCACCCTTGCTGATACATTGGCCTGTGGAAGTGTTGGTCACATCATTGGAGTTGGAGTTGTTCTTGGCCTTAAGAACATTGGTGCCATATAA 378 0.4868 MATSLMNTLPQFNGLRPHSTPTRVAVQPMRRRGKGALGVRCDFIGSQTNLIVVASTTLMLFAGRFGLAPSANRKASAGLRLEVRDSGLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKNIGAI 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1152 125 Gene3D - 42 125 IPR023618 GO:0009522|GO:0015979
Lal21g1152 125 MobiDBLite consensus disorder prediction 1 20 - -
Lal21g1152 125 PIRSF PsaK 1 125 IPR016370 -
Lal21g1152 125 ProSitePatterns Photosystem I psaG and psaK proteins signature. 95 112 IPR000549 GO:0009522|GO:0015979|GO:0016020
Lal21g1152 125 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT PSAK, CHLOROPLASTIC 1 125 - -
Lal21g1152 125 Pfam Photosystem I psaG / psaK 47 123 IPR000549 GO:0009522|GO:0015979|GO:0016020
Lal21g1152 125 SUPERFAMILY Photosystem I reaction center subunit X, PsaK 93 119 IPR035982 GO:0009522|GO:0015979|GO:0016020
Lal21g1152 125 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT V, CHLOROPLASTIC-RELATED 1 125 IPR016370 -
Lal21g1152 125 TIGRFAM PS_I_psaK_plant: photosystem I reaction center PsaK 43 125 IPR017493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1152 Lal-Chr21 14147625 14149654 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1152 K02698 - vvi:100261762 196.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1424 17 15693873 15695712 Lal21g1152 21 14147625 14149654 LSH