Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1424 ATGGCAACTTCTTTGATGACCACTCTCCCTCAGTTCAATGGCCTTAGACCCAAATTTTCACCAGCACCTCTGCACAACATGGTTACTGTCCAACCCATGAGGCGCAAGGGAAAGGGTGGTTTGGGAGTTCGTTGTGACTTTATTGGTTCACCTACTAATCTGATCATAGTGGCTTCTACAAGCCTGATGCTGTTCGCCGGAAGGTTTGGGTTGGCTCCATCAGCAAACAGAAAAGCAAGTGCAGGGCTAAAGCTGGAGTCGAGGGACTCAGGGTTGCAAACTGGTGACCCAGCTGGATTCACTCTTGCTGATACCTTGGCCTGTGGGTCTTTTGGTCACATCATTGGTGTTGGTGTTGTTCTTGGCCTTAAGAACATTGGTGCTATATAA 390 0.4846 MATSLMTTLPQFNGLRPKFSPAPLHNMVTVQPMRRKGKGGLGVRCDFIGSPTNLIIVASTSLMLFAGRFGLAPSANRKASAGLKLESRDSGLQTGDPAGFTLADTLACGSFGHIIGVGVVLGLKNIGAI 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1424 129 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT PSAK, CHLOROPLASTIC 1 129 - -
Lal17g1424 129 Pfam Photosystem I psaG / psaK 52 127 IPR000549 GO:0009522|GO:0015979|GO:0016020
Lal17g1424 129 PIRSF PsaK 1 129 IPR016370 -
Lal17g1424 129 ProSitePatterns Photosystem I psaG and psaK proteins signature. 99 116 IPR000549 GO:0009522|GO:0015979|GO:0016020
Lal17g1424 129 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT V, CHLOROPLASTIC-RELATED 1 129 IPR016370 -
Lal17g1424 129 TIGRFAM PS_I_psaK_plant: photosystem I reaction center PsaK 47 129 IPR017493 -
Lal17g1424 129 SUPERFAMILY Photosystem I reaction center subunit X, PsaK 97 123 IPR035982 GO:0009522|GO:0015979|GO:0016020
Lal17g1424 129 Gene3D - 46 129 IPR023618 GO:0009522|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1424 Lal-Chr17 15693873 15695712 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1424 K02698 - gmx:100527056 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1424 17 15693873 15695712 Lal21g1152 21 14147625 14149654 LSH