Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1124 ATGGCAGGTGGGTCTTTCAATACAAGTGCTGTTGCTAATGAGAGAGCAGAACAATATAAGGGAAGAGTTACTGCTTATGTTATCATAGCTTGCATTGTTGCTGCCACTGGAGGTTCTCTATTTGGCTATGATATTGGGATTTCAGGTGGAGTTACTTCCATGGATGATTTTCTTCAAGATTTCTTCCCTGCAGTATACAAACAAAAAATGCATGCACATGAAAACAACTACTGCAAATATGACAATCAGGGCCTTGCAGCATTTACCTCTTCTCTATACATTGCTGGTTTAGTTGCATCCCTTATCGCATCACCGGTTACAAGGAATTATGGACGTCGGGCGAGTATCATAGGCGGTGGAATCAGCTTTCTTATCGGATCGGCACTGAATGCTTCTGCTGTTAACCTGGCAATGTTGATCTTAGGCCGGGTTATGCTCGGTATAGGCATTGGATTCGGAAATCAGATATTCAAATTATACCTTAAAGTTGAAAATTTACTTGAGCTACTTCTCCTGATGGTTGCTTTGAAGGCTATTCCAGTTTATCTGTCAGAGATGGCACCGACCCACCTCCGAGGAGGCCTAAACATGATGTTTCAAGTAGCAACCACTTTCGGGATTTTTACGGCCAATATGATAAATTTCGGAACACAAAAGATTAAACCATGGGGCTGGAGGCTGTCCCTAGGCTTGGCTGCAGTACCAGCTCTTTTGATGACAGTAGGAGGGATATTTCTTCCCGAGACTCCGAATAGTTTAATCGAACGAGGATTGACAGAAAAAGGAAGGAAGCTCCTAGAAAAAATCAGAGGAACAAGTGAGGTCGACGCCGAGTTTCAAGATATGGTCGATGCAAGCGAGTTAGCAAACTCTATAAAACACCCATTTCGAAACATACTCGAAAAGAGGTATAGGCCAGAGTTGGTCATGGCTATCTTTATGCCTACATTCCAGATCCTGACTGGCATAAATTCCATTCTATTCTATGCTCCAGTGCTGTTTCAAAGCATGGGTTTTGCTGGTGATGCATCACTTTACTCCTCAGCTTTGACCGGCGGTGTTCTTGCATTTTCGACATTCATTTCCATTGCAACAGTAGATAGATTGGGTAGGAGAGTTCTGCTTATCAGTGGTGGAATGCAAATGCTTACATGCCAGGTTATAGTAGCTATAATTTTAGGAATAAAATTTGGAGAAAATGAAGAATTGTCCAAAGGCTATTCAGCACTGGTAGTGGCTTTTATTTGCTTATTTGTTCTAGCTTTTGGATGGTCATGGGGCCCACTTGGGTGGACAGTACCAAGTGAGATATTTCCATTAGAAATCAGATCAGCAGGGCAAAGTATCACAGTTGCTGTAAACCTTTTATTCACTTTCATAATTGCTCAAGCCTTCCTTGCTCTTCTTTGTTCATTCAAGTTTGGAATATTTCTCTTCTTTTCTGCTTGGATTACCATTATGACAATATATGTTATTCTCTTCTTACCTGAAACCAAGGGAATTCCCATTGAAGAAATGTCATTTATGTGGAAAAGGCATTGGTTTTGGAAAAGGATATTATTGCCTTAG 1569 0.4117 MAGGSFNTSAVANERAEQYKGRVTAYVIIACIVAATGGSLFGYDIGISGGVTSMDDFLQDFFPAVYKQKMHAHENNYCKYDNQGLAAFTSSLYIAGLVASLIASPVTRNYGRRASIIGGGISFLIGSALNASAVNLAMLILGRVMLGIGIGFGNQIFKLYLKVENLLELLLLMVALKAIPVYLSEMAPTHLRGGLNMMFQVATTFGIFTANMINFGTQKIKPWGWRLSLGLAAVPALLMTVGGIFLPETPNSLIERGLTEKGRKLLEKIRGTSEVDAEFQDMVDASELANSIKHPFRNILEKRYRPELVMAIFMPTFQILTGINSILFYAPVLFQSMGFAGDASLYSSALTGGVLAFSTFISIATVDRLGRRVLLISGGMQMLTCQVIVAIILGIKFGENEELSKGYSALVVAFICLFVLAFGWSWGPLGWTVPSEIFPLEIRSAGQSITVAVNLLFTFIIAQAFLALLCSFKFGIFLFFSAWITIMTIYVILFLPETKGIPIEEMSFMWKRHWFWKRILLP 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1124 522 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 177 520 IPR045262 GO:0015144
Lal21g1124 522 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 4 162 IPR045262 GO:0015144
Lal21g1124 522 PRINTS Sugar transporter signature 38 48 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal21g1124 522 PRINTS Sugar transporter signature 140 159 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal21g1124 522 PRINTS Sugar transporter signature 318 328 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal21g1124 522 PRINTS Sugar transporter signature 412 433 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal21g1124 522 PRINTS Sugar transporter signature 435 447 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal21g1124 522 ProSiteProfiles Major facilitator superfamily (MFS) profile. 30 499 IPR020846 GO:0022857
Lal21g1124 522 CDD MFS_STP 33 497 IPR044778 GO:0015145|GO:0015749
Lal21g1124 522 SUPERFAMILY MFS general substrate transporter 32 506 IPR036259 -
Lal21g1124 522 Pfam Sugar (and other) transporter 31 161 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lal21g1124 522 Pfam Sugar (and other) transporter 178 510 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lal21g1124 522 ProSitePatterns Sugar transport proteins signature 1. 362 379 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lal21g1124 522 PANTHER - 177 520 - -
Lal21g1124 522 PANTHER - 4 162 - -
Lal21g1124 522 Gene3D MFS general substrate transporter like domains 13 513 IPR036259 -
Lal21g1124 522 TIGRFAM SP: MFS transporter, sugar porter (SP) family 179 506 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1124 Lal-Chr21 13806082 13810550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g1124 1 520 Organic Solute Cotransporters AT4G02050 76.154 0.0 840
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1124 K24193 - gmx:100820434 890.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1124 21 13806082 13810550 Lal21g1124 21 13806082 13810550 ECH
Lal17g1373 17 15075351 15078144 Lal21g1124 21 13806082 13810550 LSH