Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0715 ATGGCAGGTGGTGGAGCTCCAGCACCAAAAGCAGATGAGCCTCAACCACACCCTCCAAAGGATCAATTACCTAACATTTATTACTGCATTACAAGTCCTCCTCCTTGGCCTGAAGCTATACTTCTGGGTTTTCAACATTTTCTTGTGATGCTTGGCACCACTGTGCTCATTCCCACTGCTCTTGTTCCCCAAATGGGAGGTGGCAATGATGAGAAGGCAAAAGTTATCCAAACACTTCTTTTTGTAGCTGGTATTAACACATTGCTACAAACACTGTTTGGAACTCGATTACCTGCAGTAATTGGAGCGTCTTATACCTTTGTTCCAACCACAATCTCGATTATTCTTGCTGGCCGATTCAGTGATGAACCAGATCCTAAAGAGAAATTCAAGAGGATAATGCAGGCAATACAGGGTGCCCTTATTGTTGCTTCAACTCTTCAAATAGTACTAGGCTTTAGTGGCCTCTGGCGCAATGTTGCAAGGTTTCTAAGCCCACTTTCAGCAGTTCCTTTGGTATCTCTTGTTGGTTTTGGGCTGTATGAGTTAGGTTTTCCGGGGGTTGCTAAATGTGTAGAGATTGGACTACCAGAGCTTATTTTGCTAGTATTTGTTTCACAGTATGTGCCCCATGTGCTACATTCGGGAAAACATATCTTCGACCGTTTTGCTGTTATCTTCACCATTGCAATTGTATGGATATATGCTCATCTACTCACAGTTGGAGGGGCTTATAACAACGCTGCACCTAAAACAAAAATTTCATGCCGCACTGATCGTGCTGGACTTATAGATGCTTCTCCTTGGATTAGAGTTCCATATCCCTTTCAATGGGGAGCACCTTCATTTGACGCGGGTGAAGCCTTTGCAATGATGATGGCAGCTTTTGTTGCTCTTGTAGAGTCCAGTGGAGCTTTTATTGCTGTATATAGGTATGCAAGTGCGACACCATTACCGCCATCTATTCTCAGTCGCGGTATTGGTTGGCAGGGAGTTGGCATTTTGTTATCAGGATTGTTCGGAACTGTCAATGCATCCTCTGTGTCTGTAGAAAATGCAGGTCTGTTGGCTTTGACCCGTGTTGGCAGTAGAAGAGTTGTGCAAATATCCGCTGGGTTTATGATTTTCTTTTCAATTCTCGGAAAATTCGGAGCAGTTTTCGCTTCCATCCCACTTCCCATTGTTGCTGCTCTGTACTGCTTGTTCTTCGCTTATGTTGGTGCTGGAGGTCTTAGTTTTCTTCAGTTCTGCAACCTCAACAGTTTTAGAACAAAGTTCATACTAGGCTTCTCTCTTTTCCTGGGTTTGTCCGTGCCACAGTACTTCAACGAGTACACGGCAATTAATGGTTTCGGACCAGTACATACAGGCGCAAGATGGTTCAATGATATAGTGAATGTTCCGTTCCAATCAAAACCGTTTGTTGCGGGCGTGGTGGCGTATTTTCTGGACAACACACTGCATAAGAAAGAAGCCAGAAAAGATAGAGGAAAACATTGGTGGGACAAGTACAAATCCTTTAAGGGAGATACAAGAAGTGAGGAGTTTTATTCATTACCTTTCAATCTGAACAAGTACTTCCCCTCAGTTTAA 1593 0.4357 MAGGGAPAPKADEPQPHPPKDQLPNIYYCITSPPPWPEAILLGFQHFLVMLGTTVLIPTALVPQMGGGNDEKAKVIQTLLFVAGINTLLQTLFGTRLPAVIGASYTFVPTTISIILAGRFSDEPDPKEKFKRIMQAIQGALIVASTLQIVLGFSGLWRNVARFLSPLSAVPLVSLVGFGLYELGFPGVAKCVEIGLPELILLVFVSQYVPHVLHSGKHIFDRFAVIFTIAIVWIYAHLLTVGGAYNNAAPKTKISCRTDRAGLIDASPWIRVPYPFQWGAPSFDAGEAFAMMMAAFVALVESSGAFIAVYRYASATPLPPSILSRGIGWQGVGILLSGLFGTVNASSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPLPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRTKFILGFSLFLGLSVPQYFNEYTAINGFGPVHTGARWFNDIVNVPFQSKPFVAGVVAYFLDNTLHKKEARKDRGKHWWDKYKSFKGDTRSEEFYSLPFNLNKYFPSV 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0715 530 Pfam Permease family 38 442 IPR006043 GO:0016020|GO:0022857|GO:0055085
Lal21g0715 530 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 1 530 - -
Lal21g0715 530 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER-LIKE PROTEIN 1 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0715 Lal-Chr21 5742299 5748880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0715 8 530 Organic Solute Cotransporters AT5G49990 80.038 0.0 853
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0715 - - gmx:100812585 980.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0715 21 5742299 5748880 Lal21g0715 21 5742299 5748880 ECH
Lal14g1532 14 16088977 16095712 Lal21g0715 21 5742299 5748880 PCT
Lal19g1089 19 14563116 14569057 Lal21g0715 21 5742299 5748880 PCT
Lal21g0715 21 5742299 5748880 Lal14g1532 14 16088977 16095712 PCT
Lal21g0715 21 5742299 5748880 Lal19g1089 19 14563116 14569057 PCT