Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1089 ATGGCAGGAGGAGCTCCAGCACCAAAAGCAGATGAACCACAGCCACATCCACCAAAAGATCAGTTACCCAATGTTTCTTACTGCATTACTAGTCCTCCTCCATGGCCTGAGGCCATACTTCTTGGTTTTCAACATTATCTTGTCATGCTTGGTACAACCGTGCTAATTCCAACTGCTCTTGTTCCTCAGATGGGAGGTGGCAATGAGGAGAAGGCGAAAGTGATCCAAACACTACTCTTTGTAGCTGGAATTAACACTTTGTTGCAATCACTGTTTGGAACTCGATTGCCTGCAGTCATTGGAGGGTCTTATACCTTTGTTCCGACGACAATCTCAATTATTCTTGCGGGTCGATTCAGTGATGAGACAGATCCAATTGAGAAATTCAAGAGGATAATGCGGGCAATCCAGGGCGCACTTATTGTTGCTTCAACTCTTCAAATAGTACTAGGCTTTAGTGGTTTATGGCGTAATGTTGCAAGGTTCTTAAGTCCACTTTCAGCAGTTCCCTTGGTGTCTCTTGTCGGTTTTGGGTTATACGAGTTGGGCTTCCCTGGGGTTGCTAAATGCGTAGAGATTGGACTGCCTGAGCTGATATTGCTGGTTTTTATTTCACAGTTCGTATCCAATGTGCTACATTCAGGAAAACATGTCTTTGACCGTTTTGCTGTTTTATTTACAATTGCAATTGTGTGGCTATATGCTTATATACTCACTGTTGGAGGGGCCTATAAGAATGCTGCACCTAAAACACAGGCAACTTGCCGGACTGATCGTGCTGGCCTAATAGATGCTGCTCCGTGGATACGAGTTCCATATCCCTTCCAATGGGGACCACCTTCATTTGATGCAGGTGAAGCCTTTGCCATGATGATGGCATCCTTCGTTGCTCTTGTAGAGTCCAGTGGAGCTTTTATTGCTGTTTATCGGTTTGCAAGTGCAACACCATTACCGCCATCTATTCTCAGTCGAGGTGTTGGTTGGCAGGGAGTTGGTATTCTGTTATCGGGATTGTTTGGAACTGTCAATGCATCCTCTGTATCTGTAGAAAACGCTGGCCTTTTGGCTTTGACTCGAGTTGGCAGTCGAAGAGTTGTGCAAATATCTGCTGGGTTTATGATTTTCTTTTCAATTCTTGGTAAATTTGGAGCAGTTTTCGCCTCCATTCCACCTTCCATTATTGCTGCTTTGTACTGCTTGTTCTTTGCTTATGTTGGGGCTGGAGGTCTTAGTTTTCTTCAGTTCTGCAACCTCAACAGTTTTAGAACAAAGTTTGTACTAGGCTTCTCCATCTTCCTGGGTTTATCTGTTGCTCAGTACTTCAATGAGTACCAAGCAATCAATGGATTTGGTCCGGTCCACACCGGAGCAAGATGGTTTAATGATATAATCAATGTGCCATTCCAATCAAAAGCATTTGTTGCTGGAATTGTAGCATATTTCTTGGACAACACACTACATAAGAAAGAAGGTGCTATTAGAAAAGACAGAGGCAAACATTGGTGGGATAAGTACAAGTCCTTCAAGGGTGACACAAGAAGTGAAGAATTCTATTCATTGCCTTTCAATCTAAACAAATATTTTCCAGCAGTGTAA 1596 0.4323 MAGGAPAPKADEPQPHPPKDQLPNVSYCITSPPPWPEAILLGFQHYLVMLGTTVLIPTALVPQMGGGNEEKAKVIQTLLFVAGINTLLQSLFGTRLPAVIGGSYTFVPTTISIILAGRFSDETDPIEKFKRIMRAIQGALIVASTLQIVLGFSGLWRNVARFLSPLSAVPLVSLVGFGLYELGFPGVAKCVEIGLPELILLVFISQFVSNVLHSGKHVFDRFAVLFTIAIVWLYAYILTVGGAYKNAAPKTQATCRTDRAGLIDAAPWIRVPYPFQWGPPSFDAGEAFAMMMASFVALVESSGAFIAVYRFASATPLPPSILSRGVGWQGVGILLSGLFGTVNASSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPPSIIAALYCLFFAYVGAGGLSFLQFCNLNSFRTKFVLGFSIFLGLSVAQYFNEYQAINGFGPVHTGARWFNDIINVPFQSKAFVAGIVAYFLDNTLHKKEGAIRKDRGKHWWDKYKSFKGDTRSEEFYSLPFNLNKYFPAV 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1089 531 Pfam Permease family 37 441 IPR006043 GO:0016020|GO:0022857|GO:0055085
Lal19g1089 531 MobiDBLite consensus disorder prediction 1 25 - -
Lal19g1089 531 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER-LIKE PROTEIN 2 531 - -
Lal19g1089 531 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 2 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1089 Lal-Chr19 14563116 14569057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1089 7 531 Organic Solute Cotransporters AT5G49990 79.848 0.0 853
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1089 - - gmx:100791553 989.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1089 19 14563116 14569057 Lal19g1089 19 14563116 14569057 ECH
Lal14g1532 14 16088977 16095712 Lal19g1089 19 14563116 14569057 LSH
Lal19g1089 19 14563116 14569057 Lal21g0715 21 5742299 5748880 PCT
Lal21g0715 21 5742299 5748880 Lal19g1089 19 14563116 14569057 PCT